[gmx-users] Constraint algorithm error
Anton Feenstra
feenstra at chem.vu.nl
Mon Jul 26 17:55:37 CEST 2004
nicolas Dinter wrote:
> Anton,
>
> Seeing that it was a constraint error I ran a NPT simulation, without any
> constraint (mdp-itp),
> then my calcul runs for about 9.845ps (for a 10ps sim) and crash for
> pressure scaling error (tau_p=10 ps, ref_p=1bar), and thus with a very small
> time step (0.00001 ps)to avoid this error. But more surprizing the box size
> do not change at all! Being far from the equilibrium density I am surprized.
That is to be expected with tau_p = 10 ps if you only run for 10 ps!
--
Groetjes,
Anton
_____________ _______________________________________________________
| | |
| _ _ ___,| K. Anton Feenstra |
| / \ / \'| | | Dept. of Pharmacochem. - Vrije Universiteit Amsterdam |
|( | )| | | De Boelelaan 1083 - 1081 HV Amsterdam - Netherlands |
| \_/ \_/ | | | Tel: +31 20 44 47608 - Fax: +31 20 44 47610 |
| | Feenstra at chem.vu.nl - www.chem.vu.nl/~feenstra/ |
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