[gmx-users] rmsd matrix from g_cluster

Raghunadha Reddy Burri burri at heineken.chemie.uni-dortmund.de
Fri Mar 19 13:14:01 CET 2004

Root Mean Square Deviation (RMSD)

In a structure alignment the score measures how far the aligned atoms are from 
each other on average.

On Friday 19 March 2004 10:42, Dr. Christoph Freudenberger wrote:
> Sorry, I thought I made this clear:
> I don't need help to disply or print the file.
> I need to know, what it tells me.
> Raghunadha Reddy Burri wrote:
> > convert to ps file
> >
> > xpm2ps -f rmsd-clust.xpm -o rmsd-clust.eps
> > gv rmsd-clust.eps
> regards

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