[gmx-users] Re: What is wrong with my .top file?

xiaobing tian xiaobingtian at yahoo.com
Fri Mar 19 17:47:00 CET 2004

Hi, Nuno,
Thank you for your patience. I followed your instructions, and it works well.
However, when i run grompp, it results the following error messages (see below). I can not figure out why. Any advices would be very appreciated.

calling C:\gromacs\bin\cpp...

processing topology...

processing coordinates...

Fatal error: number of coordinates in coordinate file (speptide_b4em.gro, 9035)

             does not match topology (speptide.top, 0)







Xiaobing Tian  Ph.D.
Department of Microbiology and Immunology
Thomas Jefferson University
1025 Walnut St., Suite 420
Philadelphia,  PA19107
Phone: 215-955-1364 (Lab)
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