[gmx-users] segmentation fault on EM64T

[Erik Lindahl]

Hi Michel,

Please send me a tpr file that causes it, preferrably along with the  
input files used to generate it (so I can alter/check things).

Cheers,

Erik

On Apr 26, 2005, at 7:47 PM, Michel Cuendet wrote:


> Hi,
>
> I tried to compile the cvs version of march 30 on Intel Xeon EM64T  
> cpus. It compiled fine with plain ./configure, but produced a  
> segmentation fault at runtime, right after the lines:
>
> starting mdrun 'Protein in water'
> 2000 steps,      2.0 ps.
>
> I tired with the option --disable-x86-64-sse, and then it works (but
> slow, I guess). This seems to point to the assembly code...
>
> Have I missed some flags, or anything ?
>
> Thanks, Michel
>
> -- 
> ++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++
> Michel Cuendet, Ph.D. student
> Laboratory of Computational Biochemistry and Chemistry
> Swiss Federal Institute of Technology in Lausanne (EPFL)
> CH-1015 Lausanne
> Switzerland                             Phone : +41 1 693 0324
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> ++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++
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Cheers,

Erik

-----------------------------------
Erik R. Lindahl <lindahl at sbc.su.se>
Assistant Professor, Computational Structural Biology
Stockholm Bioinformatics Center, Stockholm University, SE-106 91  
Stockholm
Phone: +46(0)8 5537 8564   Fax: +46(0)8 5537 8214   Cell: +46(0)704  
218767