[gmx-users] Re: Active Site

[Nancy Deng]

try NOC http://noc.ibp.ac.cn/ , a free tool which has an option to calculate
the accessible surface.
nancy

----- Original Message ----- 
From: "Wei Fu" <fuwei at adrik.bchs.uh.edu>
To: <gmx-users at gromacs.org>
Sent: Tuesday, March 29, 2005 2:57 PM
Subject: [gmx-users] Re: Active Site


> Hi, Nuro,
>
>     Thanks for your response. You are right, it is important to define the
asscessible surface. I have no idea about it. For my protein, there is a big
active site, it may have several pockets or cavities, but for my case, the
biggest one is active site since the active site of my protein is big.
>
>     Sure, I will let you know if I figure it out:-)
>
>                 Wei
>
>                 2005-03-29
>
>
>   Wei Fu (Linda)
>   Postdoctoral Research Associate
>   Department of Biology and Biochemistry
>   University of Houston
>   4800 Calhoun Rd. HSC #402C
>   Houston, TX 77204-5001   USA
>   Phone:713-743-8355(o)  713-741-6388(h)
>   Fax:713-743-8351
>   Email: fuwei at adrik.bchs.uh.edu
>   http://adrik.bchs.uh.edu/~fuwei/
>
>
>
>
>
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