[gmx-users] ffamber ports for 3.3.1

Maik Goette mgoette at mpi-bpc.mpg.de
Wed Nov 2 09:43:13 CET 2005


Hi Eric

Has the problem with the terminal hydrogen in nucleic acids been solved?

Regards

Maik Goette, Dipl. Biol.
Max Planck Institute for Biophysical Chemistry
Theoretical & computational biophysics department
Am Fassberg 11
37077 Goettingen
Germany
Tel.  : ++49 551 201 2310
Fax   : ++49 551 201 2302
Email : mgoette[at]mpi-bpc.mpg.de
         mgoette2[at]gwdg.de
WWW   : http://www.mpibpc.gwdg.de/groups/grubmueller/


Eric J. Sorin wrote:
> Hello GMX users,
>  
> Our AMBER ports for gromacs have just been extended to include new 
> version 3.3.1.  For those simulating nucleic acids, this is a nice 
> change, as 3.3.1 supports a new .hdb format that will allow use of 
> hydrogen database files for nucleic acids.  Please download from the 
> website below.  Thanks!
>  
> Eric J. Sorin
> Pande Group
> Stanford University
> http://folding.stanford.edu/ffamber/
> 
> 
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