[gmx-users] (no subject)

Fernando Mattio mattiofer at gmail.com
Fri Oct 7 14:47:07 CEST 2005

 Thank you Elena,
I think the topology was updated, but I had problems related to "Memory
access error" when i used the mdrun to perform the simulation... So I was
wondering if it is not enough memory of my computer or if I should have
somehow updated also the parameter file... Please gromacs users any
information about would be great,
Thanks in advance,
Fernando Mattio.

2005/10/7, elena.papaleo <elena.papaleo at unimib.it>:
> Dear Fernando,
> I think you can use the command pdb2gmx -f
> minimized_2water.gro -p minimized_2water.top
> to update your topology file...
> best regard
> Elena Papaleo
> Elena Papaleo, PhD Student
> Department of Biotechnology and Biosciences
> University of Milano-Bicocca
> P.zza della Scienza 2, 20126 Milano (Italy)
> email: elena.papaleo at unimib.it
> phone: +39 0264483475
-------------- next part --------------
An HTML attachment was scrubbed...
URL: <http://maillist.sys.kth.se/pipermail/gromacs.org_gmx-users/attachments/20051007/d2666789/attachment.html>

More information about the gromacs.org_gmx-users mailing list