[gmx-users] Fatal Error: topology.top not found

David van der Spoel spoel at xray.bmc.uu.se
Tue Sep 20 09:34:14 CEST 2005


On Tue, 2005-09-20 at 09:48 +0530, Atre Amol Dilip wrote:
> Hello,
> 
> I have recently installed GROMACS. When I run the pdb2gmx for the Peptide
> molecule included in the gmxdemo folder, it gives me an error message
> saying,
> 
> "Fatal Error: topology.top not found"
> 
> (topology.top file is present in the top folder)
> 
> Can somebody help me regarding this?
> 
> Thanking in advance and waiting for reply.
more info please.
command line, operating system etc.
> 
> Regards,
> Amol Atre.
> Lab No.A002,
> Chemical Engg.Dept.,
> Mumbai University Institute of Chemical Technology,
> Matunga(E), Mumbai-400019.
> 
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-- 
David.
________________________________________________________________________
David van der Spoel, PhD, Assoc. Prof., Molecular Biophysics group,
Dept. of Cell and Molecular Biology, Uppsala University.
Husargatan 3, Box 596,          75124 Uppsala, Sweden
phone:  46 18 471 4205          fax: 46 18 511 755
spoel at xray.bmc.uu.se    spoel at gromacs.org   http://xray.bmc.uu.se/~spoel
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