[gmx-users] GROMACS compilation problem

[Erik Lindahl]

Hi Daniel,

Could you run

cc --version

and post the result?  Apparently some new Linux distributions are  
shipping with a buggy prerelease of gcc.

Cheers,

Erik

On Apr 23, 2007, at 5:21 PM, Daniel Rigden wrote:

> Dear all
>
> I'm trying to compile the latest GROMACS 3.3.1 on the latest Ubuntu
> Linux.  Due to some fftw installation issue I used
>
> ./configure --with-fft=fftpack
> make
> make install
>
> All seemed to work fine, but any program I try to run now gives me a
> crash of this kind
>
> daniel at adenine: g_clustsize
>                          :-)  G  R  O  M  A  C  S  (-:
>
> *** stack smashing detected ***: g_clustsize terminated
> Aborted (core dumped)
>
> Can anyone help?
>
> Thanks
>
> Daniel
>
>
> -- 
> Dr Daniel John Rigden                     Tel:(+44) 151 795 4467
> School of Biological Sciences             FAX:(+44) 151 795 4406
> Room 101, Biosciences Building
> University of Liverpool
> Crown St.,
> Liverpool L69 7ZB, U.K.
>
>
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