[gmx-users] GROMACS compilation problem

[David van der Spoel]

Daniel Rigden wrote:
> Dear all
> 
> I'm trying to compile the latest GROMACS 3.3.1 on the latest Ubuntu
> Linux.  Due to some fftw installation issue I used 
> 
> ./configure --with-fft=fftpack
> make
> make install
> 
> All seemed to work fine, but any program I try to run now gives me a
> crash of this kind
> 
> daniel at adenine: g_clustsize
>                          :-)  G  R  O  M  A  C  S  (-:
> 
> *** stack smashing detected ***: g_clustsize terminated
> Aborted (core dumped)
> 
> Can anyone help?
> 
> Thanks
> 
> Daniel
> 
> 
this has been fixed in CVS and will be in 3.3.2 when we release it.

-- 
David.
________________________________________________________________________
David van der Spoel, PhD, Assoc. Prof., Molecular Biophysics group,
Dept. of Cell and Molecular Biology, Uppsala University.
Husargatan 3, Box 596,  	75124 Uppsala, Sweden
phone:	46 18 471 4205		fax: 46 18 511 755
spoel at xray.bmc.uu.se	spoel at gromacs.org   http://folding.bmc.uu.se
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