[gmx-users] Atoms in the .top ......

Tsjerk Wassenaar tsjerkw at gmail.com
Tue Feb 13 20:41:02 CET 2007

Hi Viswanadham,

Please explain how or where you obtained your .top and what you
possibly did to it. Did you modify it?



On 2/13/07, Viswanadham Sridhara <muta.mestri at gmail.com> wrote:
> Hello all,
> when I run grompp, I am getting Fatal Error : Atoms in the .top are
> not numbered consecutively.
> I checked the archives, this question was asked before, but I did not
> find a solution or a thread email to circumvent the problem.
> I am unable to understand where this problem is coming from, I checked
> .top, .gro files and they look fine, atleast to me.
> Looking forward to your response.
> Best Regards,
> Viswanadham
> --
> Viswanadham Sridhara,
> Research Assistant,
> Old Dominion University,
> Norfolk, Va-23529.
> _______________________________________________
> gmx-users mailing list    gmx-users at gromacs.org
> http://www.gromacs.org/mailman/listinfo/gmx-users
> Please don't post (un)subscribe requests to the list. Use the
> www interface or send it to gmx-users-request at gromacs.org.
> Can't post? Read http://www.gromacs.org/mailing_lists/users.php

Tsjerk A. Wassenaar, Ph.D.
Junior UD (post-doc)
Biomolecular NMR, Bijvoet Center
Utrecht University
Padualaan 8
3584 CH Utrecht
The Netherlands
P: +31-30-2539931
F: +31-30-2537623

More information about the gromacs.org_gmx-users mailing list