[gmx-users] Atoms in the .top ......

[Viswanadham Sridhara]

Dear Tsjerk,

I could figure out the problem and be able to solve it. The problem
araised because of the mix-up of the force-field files.

Thanks,
Vissu.

On 2/13/07, Tsjerk Wassenaar <tsjerkw at gmail.com> wrote:
> Hi Viswanadham,
>
> Please explain how or where you obtained your .top and what you
> possibly did to it. Did you modify it?
>
> Cheers,
>
> Tsjerk
>
> On 2/13/07, Viswanadham Sridhara <muta.mestri at gmail.com> wrote:
> > Hello all,
> >
> > when I run grompp, I am getting Fatal Error : Atoms in the .top are
> > not numbered consecutively.
> >
> > I checked the archives, this question was asked before, but I did not
> > find a solution or a thread email to circumvent the problem.
> >
> > I am unable to understand where this problem is coming from, I checked
> > .top, .gro files and they look fine, atleast to me.
> >
> > Looking forward to your response.
> >
> > Best Regards,
> > Viswanadham
> >
> > --
> > Viswanadham Sridhara,
> > Research Assistant,
> > Old Dominion University,
> > Norfolk, Va-23529.
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>
> --
> Tsjerk A. Wassenaar, Ph.D.
> Junior UD (post-doc)
> Biomolecular NMR, Bijvoet Center
> Utrecht University
> Padualaan 8
> 3584 CH Utrecht
> The Netherlands
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-- 
Viswanadham Sridhara,
Research Assistant,
Old Dominion University,
Norfolk, Va-23529.