[gmx-users] protein in hole

[mahbubeh zarrabi]

dear david
how can i do by editconf?whould you please help in
detail?
--- David van der Spoel <spoel at xray.bmc.uu.se> wrote:

> mahbubeh zarrabi wrote:
> > dear freinds
> >  I have made a hole in POPC128a bilayer and did
> mdrun
> > for popc(make-hole).i merged protein and popc by
> cat
> > command but protein did not put in hole in
> popc.whould
> > you please help me?
> > thanks
> > 
> start with
> man cat
> you could try by centering the hole and the protein
> on te same point 
> with editconf and then merge them using a text
> editor
> 
> > 
> >        
> >
>
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> 
> -- 
> David.
>
________________________________________________________________________
> David van der Spoel, PhD, Assoc. Prof., Molecular
> Biophysics group,
> Dept. of Cell and Molecular Biology, Uppsala
> University.
> Husargatan 3, Box 596,  	75124 Uppsala, Sweden
> phone:	46 18 471 4205		fax: 46 18 511 755
> spoel at xray.bmc.uu.se	spoel at gromacs.org  
> http://folding.bmc.uu.se
>
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