[gmx-users] protein in hole

[Mark Abraham]

>  Dear all
> i want to insert potassium channel in popc, i made
> popc+hole by make-hole but i can not to insert protein
> in popc, i merg the coordinates of the protein and the
> lipid bilayer in a single file, the protein turns out
> not to be inside the hole. I  have to orient the
> protein so that the channel axis coincides with the
> membrane normal.how can i do it by editconf or grasp?

By reading their documentation and finding out what operations they
permit. We got our knowledge by doing that, or tutorials, or trial and
error, and you'll learn a great deal more (and need to ask fewer
questions!) if you do these things.

Mark