RES: [gmx-users] superimpose pdbs

Caio Julio Martins Veloso caju at uai.com.br
Sun Jun 24 19:43:14 CEST 2007


Hi Alan,

You may use TOPOFIT. 

Caio.
  -----Mensagem original-----
  De: gmx-users-bounces at gromacs.org [mailto:gmx-users-bounces at gromacs.org]Em nome de Alan
  Enviada em: domingo, 24 de junho de 2007 14:11
  Para: Gromacs
  Assunto: [gmx-users] superimpose pdbs


  Hi!


  It may be a bit GMX off-topic: I am looking for a command line superimpose application that would be able to get all individual pdb files in folder and generated new pdb versions of them 3D superimposed. 


  Something like what SuperPose (http://wishart.biology.ualberta.ca/SuperPose/help.html) does, but then locally in my computer. 


  Many thanks in advance.


  Cheers,
  Alan

  -- 
  Alan Wilter S. da Silva, D.Sc. - CCPN Research Associate 
  Department of Biochemistry, University of Cambridge.
  80 Tennis Court Road, Cambridge CB2 1GA, UK.
  >>http://www.bio.cam.ac.uk/~awd28<< 
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