[gmx-users] superimpose pdbs

Yang Ye leafyoung at yahoo.com
Sun Jun 24 22:44:37 CEST 2007


It has a bit ease of use than g_confrm that it offers more richer 
choices for selecting atoms to be matched. See what fits to your needs.

Yang Ye

On 6/25/2007 1:10 AM, Alan wrote:
> Hi!
> It may be a bit GMX off-topic: I am looking for a command line 
> superimpose application that would be able to get all individual pdb 
> files in folder and generated new pdb versions of them 3D superimposed.
> Something like what SuperPose 
> (http://wishart.biology.ualberta.ca/SuperPose/help.html) does, but 
> then locally in my computer.
> Many thanks in advance.
> Cheers,
> Alan
> -- 
> Alan Wilter S. da Silva, D.Sc. - CCPN Research Associate
> Department of Biochemistry, University of Cambridge.
> 80 Tennis Court Road, Cambridge CB2 1GA, UK.
> >>http://www.bio.cam.ac.uk/~awd28 <http://www.bio.cam.ac.uk/%7Eawd28><<
> ------------------------------------------------------------------------
> _______________________________________________
> gmx-users mailing list    gmx-users at gromacs.org
> http://www.gromacs.org/mailman/listinfo/gmx-users
> Please search the archive at http://www.gromacs.org/search before posting!
> Please don't post (un)subscribe requests to the list. Use the 
> www interface or send it to gmx-users-request at gromacs.org.
> Can't post? Read http://www.gromacs.org/mailing_lists/users.php

More information about the gromacs.org_gmx-users mailing list