[gmx-users] installation error

pragya chohan pragyachohan at hotmail.com
Fri Nov 9 14:05:12 CET 2007

----------------------------------------> Date: Thu, 8 Nov 2007 12:35:29 +1100> From: Mark.Abraham at anu.edu.au> To: gmx-users at gromacs.org> Subject: Re: [gmx-users] installation error>> pragya chohan wrote:>> hi>> I had installed make_hole utility earlier but when i tried to run:>> make_hole.pl -f box_popc.pdb -o hole_popc.pdb -r 9.0 -lipat P8 -lipid POPC -cx 51.5 -cy 51.8>> I get :>> bash: make_hole.pl: command not found.>> So make-hole.pl, or something in its shebang line is probably not in> your path.>>> I tried reinstalling it by ./configure which completed successfully but when i ran make command i get the following error:>> This is the output from configuring GROMACS, not make_hole.pl....>> In any case, you should do "make distclean" between runs of configure> with different settings, and/or system configuration.>> Mark> _______________________________________________> gmx-users mailing list gmx-users at gromacs.org> http://www.gromacs.org/mailman/listinfo/gmx-users> Please search the archive at http://www.gromacs.org/search before posting!> Please don't post (un)subscribe requests to the list. Use the> www interface or send it to gmx-users-request at gromacs.org.> Can't post? Read http://www.gromacs.org/mailing_lists/users.php
Thanks for your reply.
when i run make distclean i get following error:

make[2]: *** No rule to make target `.deps/wnblist.Plo'.  Stop.
make[2]: Leaving directory `/home/saivikram/Desktop/gromacs/gromacs-3.3.1/src/mdlib'
make[1]: *** [distclean-recursive] Error 1
make[1]: Leaving directory `/home/saivikram/Desktop/gromacs/gromacs-3.3.1/src'
make: *** [distclean-recursive] Error 1

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