[gmx-users] Generating a solvent box

[Justin A. Lemkul]

Quoting Dilraj Lama <dennis at iitk.ac.in>:

> Hello gmx users,
>                 I have a query to ask.It would be nice if someone could
> suggest me on this.I have a tfe molecule generated using
> InsightII program package.Now I would like to create a box
> containing a fixed number of tfe molecules based on its
> density.I tried using "genbox" and "genconf" for the
> purpose but am not able to achieve my aim.If someone has

What did you try (i.e., what commands did you issue)?  You should be able to
generate at least a regular arrangement of TFE molecules with genconf.

> tried to do this before and have some idea, I would be
> thankfull if you could shed some light on the subject.
>
> Thanking you.
> --
> Dilraj Lama,
> Graduate student,
> Bioinformatics and Biomolecular Simualtion lab,
> Dept. of BSBE;IITK-kanpur,
> Uttar pradesh,India-208016.
> email:dennis at iitk.ac.in,dilraj2002 at yahoo.com
> mob:09415473973
>
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-Justin

======================

Justin A. Lemkul
Graduate Research Assistant
Department of Biochemistry
Virginia Tech
Blacksburg, VA
jalemkul at vt.edu | (540) 231-9080
http://bevanlab.biochem.vt.edu/Pages/Personal/justin/

======================