[gmx-users] Unable to view trajectory in pymol or vmd
MQO.Carlos Javier Nunez Aguero
carlosjavierna at gmail.com
Tue Oct 14 08:22:40 CEST 2008
1. Load the *.gro file
2. Load the *.trr file
See the Amber basic workshop - tutorial 2 for more ideas:
2008/10/14 vivek sharma <viveksharma.iitb at gmail.com>
> Hi There,
> I have few MD trajectory, I want to analyze them visually (other than ngmx
> option as it gives very few option).
> I tried for opening those trajectories in vmd and pymol but not able to
> view them. It shows me the trajectory loaded, but not viewing anything.
> Is there any check to be doen for viewing trajectory in these visualization
> tools ?
> Or is it because of the size of the trajectory as I am having trajectories
> of around 10 nsec.
> Please suggest.
> With Thanks,
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