[gmx-users] How to start the Normal Modes Analysis?

Justin A. Lemkul jalemkul at vt.edu
Thu Aug 13 22:37:10 CEST 2009

Chih-Ying Lin wrote:
> Hi
> I read the Manual and still have no idea about the Normal Modes Analysis.
> How to start it?

There's not necessarily going to be a how-to for everything out there.  The 
manual lists the steps for the calculation (section 3.11).  The references cited 
therein (ref. 38-41) will probably provide you with some useful information. 
For further details, consult simulation texts or other literature.


> Thank you
> Lin
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Justin A. Lemkul
Ph.D. Candidate
ICTAS Doctoral Scholar
Department of Biochemistry
Virginia Tech
Blacksburg, VA
jalemkul[at]vt.edu | (540) 231-9080


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