[gmx-users] How to start the Normal Modes Analysis?

[Tsjerk Wassenaar]

Hi,

Start out with reading and only stop reading when you grasp what it
is, what it does, what it can do and what it can't do.

Tsjerk

On Thu, Aug 13, 2009 at 10:37 PM, Justin A. Lemkul<jalemkul at vt.edu> wrote:
>
>
> Chih-Ying Lin wrote:
>>
>>
>> Hi
>> I read the Manual and still have no idea about the Normal Modes Analysis.
>>
>> How to start it?
>>
>
> There's not necessarily going to be a how-to for everything out there.  The
> manual lists the steps for the calculation (section 3.11).  The references
> cited therein (ref. 38-41) will probably provide you with some useful
> information. For further details, consult simulation texts or other
> literature.
>
> -Justin
>
>>
>> Thank you
>> Lin
>>
>>
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>>
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>
> --
> ========================================
>
> Justin A. Lemkul
> Ph.D. Candidate
> ICTAS Doctoral Scholar
> Department of Biochemistry
> Virginia Tech
> Blacksburg, VA
> jalemkul[at]vt.edu | (540) 231-9080
> http://www.bevanlab.biochem.vt.edu/Pages/Personal/justin
>
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-- 
Tsjerk A. Wassenaar, Ph.D.
Junior UD (post-doc)
Biomolecular NMR, Bijvoet Center
Utrecht University
Padualaan 8
3584 CH Utrecht
The Netherlands
P: +31-30-2539931
F: +31-30-2537623