[gmx-users] xmgrace plot

Justin A. Lemkul jalemkul at vt.edu
Tue Dec 8 12:47:52 CET 2009

Henry Yang wrote:
> Hello Jon,
> Thnx. One more question. I have the output of every 10 ns simulation 
> over 50 ns. For every 10 ns simulation step I have the .xvg file . Is 
> there any way in xmgrace so that I can concatenate all the .xvg file 
> from 0 to 50 ns simulation and show them one xmgrace graph
> Thanks again

It is probably easier to simply concatenate your trajectory files (trjcat) 
and/or energy files (eneconv) so you don't have to worry about running multiple 
commands, concatenating all the output of every analysis, and dealing with 
duplicate start/end times.


> Henry
> ------------------------------------------------------------------------
> *From:* Jon Fuller <jonathan.fuller at gmail.com>
> *To:* Discussion list for GROMACS users <gmx-users at gromacs.org>
> *Sent:* Tue, December 8, 2009 11:53:25 AM
> *Subject:* Re: [gmx-users] xmgrace plot
>  >From the command line you can type xmgrace file1.xvg file2.xvg (where 
> file1 and file2 are the filenames!).
> Jon
> 2009/12/8 Henry Yang <henryynag at yahoo.com <mailto:henryynag at yahoo.com>>
>     Hello everyone,
>     I am also new to xmgrace. I have two .xvg file which I have got from
>     the simulation data analysis.  How can I open both of them in one
>     xmgrace graph with two distinct color? How can I proceed with the
>     comand?
>     I know this is very basic but I have to learn!
>     Pls give me response.
>     Henry
>     Biochemistry
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Justin A. Lemkul
Ph.D. Candidate
ICTAS Doctoral Scholar
Department of Biochemistry
Virginia Tech
Blacksburg, VA
jalemkul[at]vt.edu | (540) 231-9080


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