[gmx-users] DPPC to CG DPPC

XAvier Periole x.periole at rug.nl
Tue Dec 15 16:55:18 CET 2009

> I have downloaded the 128 DPPC lipid molecules from Dr. Tielmen's  
> Website and I am trying to convert the Atomistic structure to CG  
> structure. For that I am using atom2cg script provided by the  
> martini folks but it doesn't convert the Atomistic structure to CG  
> structure. atom2cg script works well for converting the atomistic  
> structure of PROTEIN to CG structure of protein but for LIPIDS it  
> doesn't work. Does anyone know how can I convert the 128 DPPC  
> atomistic structure of lipids to CG structure.
This is correct. atom2cg is only working for proteins ...

I would suggest you take dppc structure file from the martini web site!

> Best Regards,
> Sunny
> -- 
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