[gmx-users] How to put more solutes into the system ?
Mark Abraham
Mark.Abraham at anu.edu.au
Wed Dec 23 08:33:34 CET 2009
Chih-Ying Lin wrote:
> Hi
> I have a system - solutes with water.
> The system has been under MD simulation for 100 ns.
> Now, I want to put more solutes in it.
> Would you please tell me which command can make it ?
Go back to the start, take a coordinate file with a suitable periodic
box defined (editconf), and replicate it suitably (genconf), then
solvate that (genbox), then equilibrate.
You could replicate the solvated box, but it's more trouble than it is
worth.
Mark
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