[gmx-users] problem in creating topol.tpr file

[Justin A. Lemkul]

nitu sharma wrote:
> Dear All,
> 
>                     I want to run the gromacs 4.0.3 but I am unable in 
> creating topol.tpr file when I put the grommp command it shows error  
> like this
> 
> "Program grompp, VERSION 4.0.3
> Source code file: gmx_fatal.c, line: 481
> 
> Fatal error:
> Too many warnings (1), grompp terminated.
> If you are sure all warnings are harmless, use the -maxwarn option."and 
> after putting the command  "gmxdump -s topol.tpr" the output shows is -
> 
> "Program gmxdump, VERSION 4.0.3
> Source code file: gmxfio.c, line: 736
> 
> Can not open file:
> topol.tpr"
> 
> could you please let me know about what problem is existing and what 
> could be the solution of this problem.
> 

Surely grompp has printed what the warning was (as it did in a previous message 
you sent).  Read the warning, fix whatever  it is, and try again.

Certainly gmxdump won't work, because topol.tpr never got created.

-Justin

> Thank you very  much in advance.
> 
> Nitu Sharma
> 
> Structural Biology lab
> Schoolof life Sciences
> Jawaherlal nehru university
> New Delhi, India
> 
> 
> 
> 
> 
> 
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-- 
========================================

Justin A. Lemkul
Graduate Research Assistant
Department of Biochemistry
Virginia Tech
Blacksburg, VA
jalemkul[at]vt.edu | (540) 231-9080
http://www.bevanlab.biochem.vt.edu/Pages/Personal/justin

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