[gmx-users] x2top_d running for too long

[Mark Abraham]

vivek sharma wrote:
> Hi All,
> I am trying to generate the topology file for some molecule using 
> x2top_d. I have fired the command as:
> */x2top_d -f Bromo-WR99210.pdb -o Bromo-WR99210.top -r Bromo-WR99210.rtp
> 
> /*This is executing from last 16 hours!!!!, I dont know whether it takes 
> this much time or is there any problem with my run.
> 
> Can anybody give an idea of why the run is taking too long ?

Something is broken. There is no need to run x2top in double-precision, 
but this should not be the problem.

Mark