[gmx-users] x2top_d running for too long

vivek sharma viveksharma.iitb at gmail.com
Wed Jun 10 11:39:04 CEST 2009


Hi Mark,
Thanks for your reply.
But I didn't got what does it mean?

2009/6/10 Mark Abraham <Mark.Abraham at anu.edu.au>

> vivek sharma wrote:
>
>> Hi All,
>> I am trying to generate the topology file for some molecule using x2top_d.
>> I have fired the command as:
>> */x2top_d -f Bromo-WR99210.pdb -o Bromo-WR99210.top -r Bromo-WR99210.rtp
>>
>> /*This is executing from last 16 hours!!!!, I dont know whether it takes
>> this much time or is there any problem with my run.
>>
>> Can anybody give an idea of why the run is taking too long ?
>>
>
> Something is broken. There is no need to run x2top in double-precision, but
> this should not be the problem.
>

>
> Mark
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