[gmx-users] non squares box

Omer Markovitch omermar at gmail.com
Sun Jun 21 13:13:21 CEST 2009

I am not sure how this addresses my problem. I am getting "broken" structure
at the end of the MD (in confout.gro), and want to be sure that GMX treat it
correctly during the MD.

Koby Levy research group,
Weizmann Institute of Science.

On Sun, Jun 21, 2009 at 13:42, Tsjerk Wassenaar <tsjerkw at gmail.com> wrote:

> To check your periodicity use genconf:
> genconf -f in.pdb -o out.pdb -nbox 2 2 2
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