[gmx-users] DSSP hangs for days

[Carsten Kutzner]

On Jun 28, 2009, at 10:46 AM, sharada wrote:

> Hi,
>  I waited for it to finish for  almost 5 days nothing happened  
> except creation of  those files.  I had posted a similar  mail some  
> time back. Is there no solution for this.  Is it something to do  
> with speed of the system?  I ran the program on HP dual core system.

Hi,

there were a few issues in do_dssp which I fixed recently. Could you  
try the most recent
version from the git repository, maybe on a short trajectory first?

Carsten