[gmx-users] How to create .pdb files?

[Justin A. Lemkul]

Joseph Johnson wrote:
> I have tried to export .pdb files from ChemBio3D Ultra but it does not 
> do a very good job.  What is the best or simply a good, reliable method 
> of generating a .pdb file?

If it is simply a formatting issue, you can fix it yourself using the PDB format 
guidelines:

http://www.wwpdb.org/docs.html

If the software just isn't well-suited to this purpose, I find that the PRODRG 
server is useful for such purposes.

-Justin

> 
> Thanks for your help :)
> Casey
> 
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-- 
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Justin A. Lemkul
Ph.D. Candidate
ICTAS Doctoral Scholar
Department of Biochemistry
Virginia Tech
Blacksburg, VA
jalemkul[at]vt.edu | (540) 231-9080
http://www.bevanlab.biochem.vt.edu/Pages/Personal/justin

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