[gmx-users] Failing installation with --enable-mpi option

[Bhanu]

Thanks Justin, will try your suggestion..

2009/5/20 Justin A. Lemkul <jalemkul at vt.edu>:
>
>
> Bhanu wrote:
>>
>> I tried to install Gromacs on my Core2Quad pc with the command
>>
>>  ./configure --enable-mpi --disable-nice --program-suffix="_mpi"
>>
>> it is showing the following error result:
>>
>> [sandaka at bhanu gromacs-4.0.3]$ ./configure --enable-mpi --disable-nice
>> --program
>> -suffix="_mpi"
>> checking build system type... i686-pc-linux-gnu
>> checking host system type... i686-pc-linux-gnu
>> checking for a BSD-compatible install... /usr/bin/install -c
>> checking whether build environment is sane... yes
>> /bin/sh: /home/sandaka/Desktop/all: No such file or directory
>> configure: WARNING: `missing' script is too old or missing
>> checking for a thread-safe mkdir -p... /bin/mkdir -p
>> checking for gawk... gawk
>> checking whether make sets $(MAKE)... yes
>> checking how to create a ustar tar archive... gnutar
>> checking for cc... cc
>> checking for C compiler default output file name... a.out
>> checking whether the C compiler works... yes
>> checking whether we are cross compiling... no
>> checking for suffix of executables...
>> checking for suffix of object files... o
>> checking whether we are using the GNU C compiler... yes
>> checking whether cc accepts -g... yes
>> checking for cc option to accept ISO C89... none needed
>> checking for style of include used by make... GNU
>> checking dependency style of cc... gcc3
>> checking dependency style of cc... gcc3
>> checking for mpxlc... no
>> checking for mpicc... mpicc
>> checking whether the MPI cc command works... yes
>> checking for catamount... no
>> checking how to run the C preprocessor... mpicc -E
>> checking whether mpicc accepts -O3... yes
>> checking whether mpicc accepts -funroll-all-loops... yes
>> checking whether mpicc accepts  -O3 -fomit-frame-pointer
>> -finline-functions -Wall -Wno-unused -funroll-all-loops... yes
>> checking for grep that handles long lines and -e... /bin/grep
>> checking for egrep... /bin/grep -E
>> checking for ANSI C header files... no
>> checking for sys/types.h... yes
>> checking for sys/stat.h... yes
>> checking for stdlib.h... yes
>> checking for string.h... yes
>> checking for memory.h... yes
>> checking for strings.h... yes
>> checking for inttypes.h... yes
>> checking for stdint.h... yes
>> checking for unistd.h... yes
>> checking whether byte ordering is bigendian... no
>> checking for int... yes
>> checking size of int... configure: error: cannot compute sizeof (int)
>> See `config.log' for more details.
>>
>> Am attaching the config.log file herein. I've Openmpi and fftw already
>> installed and in the path.. Couldn't understand what is the error!
>>
>>
>
> Have a look at this thread:
>
> http://www.gromacs.org/pipermail/gmx-users/2008-November/037935.html
>
> -Justin
>
>>
>>
>>
>>
>> ------------------------------------------------------------------------
>>
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>
> --
> ========================================
>
> Justin A. Lemkul
> Ph.D. Candidate
> ICTAS Doctoral Scholar
> Department of Biochemistry
> Virginia Tech
> Blacksburg, VA
> jalemkul[at]vt.edu | (540) 231-9080
> http://www.bevanlab.biochem.vt.edu/Pages/Personal/justin
>
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