[gmx-users] pdb2gmx : treat CL as C

Mark Abraham Mark.Abraham at anu.edu.au
Tue Nov 17 05:48:15 CET 2009

Nilesh Dhumal wrote:
> Hello,
> My system is having chlorin atoms. Duing pdb2gmx it treat Chlorne atoms as
> carbon.
> Can you tell me where is the problem. Is there any prblem in my pdb file

The problem could be in any number of places, and you've not told us 
enough about your simulation system, command lines, inputs and outputs 
for us to tell.


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