[gmx-users] distance from solute atom to the edge of the box

[Arden Perkins]

Oh. You are correct. I've gotten a little rusty. Thanks!

On Tue, Jan 12, 2010 at 9:10 AM, Justin A. Lemkul <jalemkul at vt.edu> wrote:

>
>
> Arden Perkins wrote:
>
>> Also, you can type  "  -h  " in your terminal and it will bring up a list
>> of commands and options for the program and can usually explain what they
>> mean/do. For example: -h pdb2gmx
>>
>
> Such a command is incorrect.  The -h flag must follow the Gromacs tool,
> otherwise you will undoubtedly receive "-h: command not found."
>
> -Justin
>
> Arden Perkins
>>
>> On Tue, Jan 12, 2010 at 4:17 AM, leila karami <karami.leila1 at gmail.com<mailto:
>> karami.leila1 at gmail.com>> wrote:
>>
>>    Hi
>>        How is determined distance from solute atom to the edge of the box
>>    in editconf command (what criterion)?
>>
>>    Any help will highly appreciated!
>>
>>
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>>
> --
> ========================================
>
> Justin A. Lemkul
> Ph.D. Candidate
> ICTAS Doctoral Scholar
> MILES-IGERT Trainee
> Department of Biochemistry
> Virginia Tech
> Blacksburg, VA
> jalemkul[at]vt.edu | (540) 231-9080
> http://www.bevanlab.biochem.vt.edu/Pages/Personal/justin
>
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