[gmx-users] GMXRC Problem

Tsjerk Wassenaar tsjerkw at gmail.com
Mon Jan 25 08:27:37 CET 2010


Hi Pawan,

Check which shell you're actually running (probably bash), and source
the shell specific GMXRC file (GMXRC.bash).

Cheers,

Tsjerk

On Mon, Jan 25, 2010 at 8:19 AM, pawan raghav <pwnrghv at gmail.com> wrote:
> Dear Justin,
>
> I have some problem regarding GMXRC execution, I got an error while using
> gromacs-4.0.7 on windows vista using cygwin i.e.
>
> /usr/local/bin/GMXRC: line 35: return: can only  'return' from a function or
> sourced script.
> /usr/local/bin/GMXRC: line 44:CSH::command not found
> /cygdrive/c/Gromacs/bin/GMXRC.csh:line 8: syntax error near expected token
> 'setenv'
> /cygdrive/c/Gromacs/bin/GMXRC.csh: line 8: 'if<!$ LD_LIBRARY_PATH> Setenv
> LD_LIBRARY_PATH "" '
>
> So please tell how to setenv to execute GMXRC.
>
> --
> Pawan Kumar Raghav
> Bioinformatician
> Stem Cell and Gene Therapy Research Group
> Division of Radiation Biosciences
> INMAS, DRDO
> Timarpur Delhi-110054
>
> --
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-- 
Tsjerk A. Wassenaar, Ph.D.

Computational Chemist
Medicinal Chemist
Neuropharmacologist



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