[gmx-users] Gromacs 4.0.6 installation error

Dian Jiao oscarjiao at gmail.com
Sat Mar 6 00:09:37 CET 2010


I got it to work finally. Didn't install fftw earlier. Thanks.

On Fri, Mar 5, 2010 at 4:02 PM, Mark Abraham <Mark.Abraham at anu.edu.au>wrote:

> On 6/03/2010 5:05 AM, Dian Jiao wrote:
>
>> Actually, I tried 4.0.7 first from this link,
>> http://www.gromacs.org/index.php?title=Download_%26_Installation
>>
>> It didn't work (same error). That's why I downloaded 4.0.6 from the same
>> webpage.
>>
>> On Fri, Mar 5, 2010 at 10:51 AM, Justin A. Lemkul <jalemkul at vt.edu
>> <mailto:jalemkul at vt.edu>> wrote:
>>
>>
>>
>>    Dian Jiao wrote:
>>
>>        I was following the instruction to install gromacs 4.0.6 on my
>>        machine.
>>
>>        ./configure --enable-threads --enable-float --|enable-sse
>>        --prefix=[mypath]|
>>
>
> Don't enable threads. Do follow an actual installation guide like on the
> GROMACS webpage.
>
> Mark
>
>         make
>>        make install
>>        The configure looks ok but no Makefile is generated. When I do
>>        make or make install, it gives me the error:
>>
>>        make: *** No targets specified and no makefile found.  Stop.
>>
>>        There are couple makefiles in the directory though, Makefile.in
>>        and Makefile.am, do I need to rename one of them to Makefile to
>>        make it work?
>>
>>
>>    Per the warning on the Gromacs homepage, version 4.0.6 is a broken
>>    distribution.  Use version 4.0.7 instead.
>>
>>    -Justin
>>
>>        Dian
>>
>>
>>    --
>>    ========================================
>>
>>    Justin A. Lemkul
>>    Ph.D. Candidate
>>    ICTAS Doctoral Scholar
>>    MILES-IGERT Trainee
>>    Department of Biochemistry
>>    Virginia Tech
>>    Blacksburg, VA
>>    jalemkul[at]vt.edu <http://vt.edu> | (540) 231-9080
>>
>>    http://www.bevanlab.biochem.vt.edu/Pages/Personal/justin
>>
>>    ========================================
>>    --
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