March 2010 Archives by subject
Starting: Mon Mar 1 01:11:06 CET 2010
Ending: Wed Mar 31 23:50:12 CEST 2010
Messages: 710
- [gmx-users] 2D NPT simulations
Sai Pooja
- [gmx-users] [help]How to produce .top file from Material Studio
szewczyk at ualberta.ca
- [gmx-users] [help]How to produce .top file from Material Studio
程迪
- [gmx-users] [help]How to produce .top file from Material Studio
Yang Ye
- [gmx-users] about g_sas analysis
supti mukherjee
- [gmx-users] about g_sas analysis
Milan Melichercik
- [gmx-users] about g_sas analysis
Tsjerk Wassenaar
- [gmx-users] about Git in Gromacs
babu gokul
- [gmx-users] about Git in Gromacs
Mark Abraham
- [gmx-users] About Git version of Gromacs
babu gokul
- [gmx-users] About Git version of Gromacs
Mark Abraham
- [gmx-users] about water models
Alan
- [gmx-users] about water models
Berk Hess
- [gmx-users] Re: about water models
Alan
- [gmx-users] about water models
Dallas B. Warren
- [gmx-users] Re: AMBER force fields for ATP
Thomas Piggot
- [gmx-users] Anisotropic pressure control
Dallas B. Warren
- [gmx-users] RE: Anisotropic pressure control
Justin A. Lemkul
- [gmx-users] RE: Anisotropic pressure control
Matteus Lindgren
- [gmx-users] averaged pressure not consistent with set value
Wu Rongqin
- [gmx-users] averaged pressure not consistent with set value
Justin A. Lemkul
- [gmx-users] averaged pressure not consistent with set value
Sander Pronk
- [gmx-users] Binding energy for two proteins
jorge_quintero at ciencias.uis.edu.co
- [gmx-users] Binding energy for two proteins
Justin A. Lemkul
- [gmx-users] Brownian Dynamics - Tabulated Potential
Jun Soo Kim
- [gmx-users] Brownian Dynamics - Tabulated Potential
Berk Hess
- [gmx-users] Brownian Dynamics - Tabulated Potential
Jun Soo Kim
- [gmx-users] Calculating Binding Affinity between Protein and Ligand using FEP
Justin A. Lemkul
- [gmx-users] Calculating Binding Affinity between Protein and Ligand using FEP
sunita gupta
- [gmx-users] Can GROMACs use multiple van der Waals potentials and multiple van der Waals potential cutoffs?
David van der Spoel
- [gmx-users] Can GROMACs use multiple van der Waals potentials and multiple van der Waals potential cutoffs?
hong bingbing
- [gmx-users] Cannot allocate memory
lina
- [gmx-users] Cannot allocate memory
Mark Abraham
- [gmx-users] center peptide in simulation box
politr at fh.huji.ac.il
- [gmx-users] center peptide in simulation box
Mark Abraham
- [gmx-users] center peptide in simulation box
Maurício Menegatti Rigo
- [gmx-users] CG Force and Potential through do_force()
Sikandar Mashayak
- [gmx-users] CG Force and Potential through do_force()
Mark Abraham
- [gmx-users] CG Force and Potential through do_force()
Sikandar Mashayak
- [gmx-users] CG Force and Potential through do_force()
Mark Abraham
- [gmx-users] CG Force and Potential through do_force()
XAvier Periole
- [gmx-users] CG Force and Potential through do_force()
Sikandar Mashayak
- [gmx-users] CG Force and Potential through do_force()
Sikandar Mashayak
- [gmx-users] CG Force and Potential through do_force()
Mark Abraham
- [gmx-users] CG Force and Potential through do_force()
Mark Abraham
- [gmx-users] CG Force and Potential through do_force()
Sikandar Mashayak
- [gmx-users] CG Force and Potential through do_force()
Mark Abraham
- [gmx-users] charge group assignment with AMBER parameters
Jacob Spooner
- [gmx-users] charge group assignment with AMBER parameters
Justin A. Lemkul
- [gmx-users] charge group assignment with AMBER parameters
Jacob Spooner
- [gmx-users] charge group assignment with AMBER parameters
Justin A. Lemkul
- [gmx-users] checkpointing in 4.0.7
Dr. Leonid Yelash
- [gmx-users] checkpointing in 4.0.7
Mark Abraham
- [gmx-users] checkpointing in 4.0.7
Dr. Leonid Yelash
- [gmx-users] Chloroform as Solvent
Esteban Gabriel Vega Hissi
- [gmx-users] Chloroform as Solvent
Justin A. Lemkul
- [gmx-users] Re: Choice of value of rlist, rvdw and rcoulomb
Lum Nforbi
- [gmx-users] Re: Choice of value of rlist, rvdw and rcoulomb
Justin A. Lemkul
- [gmx-users] compile problem on Centos X86_64 with gcc44 and fftw2
Wu Rongqin
- [gmx-users] compile problem on Centos X86_64 with gcc44 and fftw2
Justin A. Lemkul
- [gmx-users] configure error
lina
- [gmx-users] configure error
Mark Abraham
- [gmx-users] Re: configure error
lina
- [gmx-users] Constraining periodic cell
David Chalmers
- [gmx-users] Constraining periodic cell
David van der Spoel
- [gmx-users] Constraining periodic cell
David Chalmers
- [gmx-users] Constraining periodic cell
David van der Spoel
- [gmx-users] Constraining periodic cell
Berk Hess
- [gmx-users] Continuous trajectory from trjconv?
Pablo Englebienne
- [gmx-users] Continuous trajectory from trjconv?
Tsjerk Wassenaar
- [gmx-users] Re: Continuous trajectory from trjconv?
Pablo Englebienne
- [gmx-users] Converting a solvent box file from Amber
Simone Cirri
- [gmx-users] Converting a solvent box file from Amber
Justin A. Lemkul
- [gmx-users] Converting a solvent box file from Amber
David van der Spoel
- [gmx-users] Converting a solvent box file from Amber
Justin A. Lemkul
- [gmx-users] Converting SDF to Mol2 Format
Nancy
- [gmx-users] correlation function 'time value' ?
Ramachandran G
- [gmx-users] cross-correlations as a function of interatomic distance
Mark Abraham
- [gmx-users] cross-correlations as a function of interatomic distance
Tsjerk Wassenaar
- [gmx-users] cross-correlations as a function of interatomic distance
shahab shariati
- [gmx-users] cross-correlations as a function of interatomic distance
shahab shariati
- [gmx-users] cutoff problem
Qian Wang
- [gmx-users] cutoff problem
Justin A. Lemkul
- [gmx-users] Re: cutoff problem
Vitaly V. Chaban
- [gmx-users] Re: cutoff problem
XAvier Periole
- [gmx-users] Re: cutoff problem
Vitaly V. Chaban
- [gmx-users] Re: cutoff problem
Justin A. Lemkul
- [gmx-users] Re: cutoff problem
XAvier Periole
- [gmx-users] cvs version
Mu Yuguang (Dr)
- [gmx-users] cvs version
Yang Ye
- [gmx-users] defining value in the mdp file
XAvier Periole
- [gmx-users] defining value in the mdp file
Berk Hess
- [gmx-users] defining value in the mdp file
XAvier Periole
- [gmx-users] density tip3p
nishap.patel at utoronto.ca
- [gmx-users] density tip3p
Sander Pronk
- [gmx-users] density tip3p
nishap.patel at utoronto.ca
- [gmx-users] density tip3p
nishap.patel at utoronto.ca
- [gmx-users] density tip3p
Mark Abraham
- [gmx-users] density vs time
nishap.patel at utoronto.ca
- [gmx-users] density vs time
Justin A. Lemkul
- [gmx-users] density vs time
Dallas B. Warren
- [gmx-users] density vs time
Justin A. Lemkul
- [gmx-users] density vs time
nishap.patel at utoronto.ca
- [gmx-users] density vs time
Justin A. Lemkul
- [gmx-users] Re: density vs time
Vitaly V. Chaban
- [gmx-users] Re: density vs time
nishap.patel at utoronto.ca
- [gmx-users] Re:density vs time
Vitaly V. Chaban
- [gmx-users] Difference between kinetic energy from .xvg file and calculated kinetic energy from velocities
Mark Abraham
- [gmx-users] RE: Difference between kinetic energy from .xvg file and calculated kinetic energy from velocities
Samantha Sanders
- [gmx-users] RE: Difference between kinetic energy from .xvg file and calculated kinetic energy from velocities
Mark Abraham
- [gmx-users] Difference between kinetic energy from .xvg file and calculated kinetic energy from velocities
Samantha Sanders
- [gmx-users] diffusion coefficient of oxygen
Sunil Thapa
- [gmx-users] diffusion coefficient of oxygen
Justin A. Lemkul
- [gmx-users] diffusion coefficient of oxygen
Berk Hess
- [gmx-users] diffusion coefficient of oxygen molecule
Sunil Thapa
- [gmx-users] diffusion coefficient of oxygen molecule
Erik Marklund
- [gmx-users] diffusion coefficient of oxygen molecule
Amit Choubey
- [gmx-users] Re: diffusion coefficient of oxygen molecule
Vitaly V. Chaban
- [gmx-users] RE:directed trajectories
lloyd riggs
- [gmx-users] RE:directed trajectories
Tsjerk Wassenaar
- [gmx-users] RE:directed trajectories
Mark Abraham
- [gmx-users] Distance for contacts of 0.6 nm
Stefan Hoorman
- [gmx-users] Distance for contacts of 0.6 nm
David van der Spoel
- [gmx-users] Distorted protein structure after MD simulation
sonali dhindwal
- [gmx-users] Distorted protein structure after MD simulation
Mark Abraham
- [gmx-users] Distorted protein structure after MD simulation
prajwal nandekar
- [gmx-users] Dynamic cross correlation map
sukesh chandra gain
- [gmx-users] Dynamics cross correlation map
sukesh chandra gain
- [gmx-users] Dynamics cross correlation map
Tsjerk Wassenaar
- [gmx-users] Dynamics cross correlation map
sukesh chandra gain
- [gmx-users] Dynamics cross correlation map
Ran Friedman, Biochemisches Inst.
- [gmx-users] Dynamics cross correlation map
Tsjerk Wassenaar
- [gmx-users] editconf/genbox: molecular complex outside simulation box
durmaz at zib.de
- [gmx-users] editconf/genbox: molecular complex outside simulation box
Justin A. Lemkul
- [gmx-users] editconf/genbox: molecular complex outside simulation box
vedat durmaz
- [gmx-users] energy minimization
shahab shariati
- [gmx-users] energy minimization
Justin A. Lemkul
- [gmx-users] energy minimization of a box containing two Na+ ions and water does not converge
Ozge Engin
- [gmx-users] energy minimization of a box containing two Na+ ions and water does not converge
Justin A. Lemkul
- [gmx-users] energy minimization of a box containing two Na+ ions and water does not converge
Ozge Engin
- [gmx-users] Energy per residue
afsaneh maleki
- [gmx-users] Energy per residue
Justin A. Lemkul
- [gmx-users] Energy per residue
afsaneh maleki
- [gmx-users] Energy per residue
Justin A. Lemkul
- [gmx-users] ethanol bond types
nishap.patel at utoronto.ca
- [gmx-users] ethanol bond types
David van der Spoel
- [gmx-users] ethanol bond types
nishap.patel at utoronto.ca
- [gmx-users] ethanol bond types
Dallas B. Warren
- [gmx-users] exclusions for a specific model
Cristiano De Michele
- [gmx-users] exclusions for a specific model
Mark Abraham
- [gmx-users] Exploding box (in one dimension) Semi-isotropic pressure coupling?
sapna sarupria
- [gmx-users] Exploding box (in one dimension) Semi-isotropic pressure coupling?
Sander Pronk
- [gmx-users] Exploding box (in one dimension) Semi-isotropic pressure coupling?
Sander Pronk
- [gmx-users] Exploding box (in one dimension) Semi-isotropic pressure coupling?
sapna sarupria
- [gmx-users] Exploding box (in one dimension) Semi-isotropic pressure coupling?
sapna sarupria
- [gmx-users] Extending simulations
Carla Jamous
- [gmx-users] Extending simulations
Milan Melichercik
- [gmx-users] Extending simulations
Justin A. Lemkul
- [gmx-users] External Force and Box Size
David van der Spoel
- [gmx-users] External Force and Box Size
Archana S Achalere
- [gmx-users] External forces
ROHIT MALSHE
- [gmx-users] External forces
Justin A. Lemkul
- [gmx-users] extract subsystem energy: problem with mdrun -rerun and LJ(SR)
Mark Abraham
- [gmx-users] extract subsystem energy: problem with mdrun -rerun and LJ(SR)
Andrea Minoia
- [gmx-users] extract subsystem energy: problem with mdrun -rerun and LJ(SR)
Andrea Minoia
- [gmx-users] extract subsystem energy: problem with mdrun -rerun and LJ(SR)
Andrea Minoia
- [gmx-users] Facing difficulty to install gromacs -reg
ITHAYARAJA
- [gmx-users] Facing difficulty to install gromacs -reg
Justin A. Lemkul
- [gmx-users] Fail to reproduce shifted VDW
吴鹏
- [gmx-users] Fatal error: Atomtype Qd not found
rainy908 at yahoo.com
- [gmx-users] Fatal error: Atomtype Qd not found
Justin A. Lemkul
- [gmx-users] Fatal error: Atomtype Qd not found
rainy908 at yahoo.com
- [gmx-users] Fatal error: Atomtype Qd not found
Justin A. Lemkul
- [gmx-users] Fatal error: Atomtype Qd not found
rainy908 at yahoo.com
- [gmx-users] FEP dEkin/dlambda dG/dl constr. values continuously coming out 0.00000e+00
sunita gupta
- [gmx-users] FEP dEkin/dlambda dG/dl constr. values continuously coming out 0.00000e+00
Sander Pronk
- [gmx-users] Force between groups
Michael McGovern
- [gmx-users] Force between groups
Mark Abraham
- [gmx-users] free energy
afsaneh maleki
- [gmx-users] free energy
Justin A. Lemkul
- [gmx-users] Free Energy Calculation
Anirban Ghosh
- [gmx-users] Free Energy Calculation
Anirban Ghosh
- [gmx-users] Free Energy Calculation
Sander Pronk
- [gmx-users] Free Energy Calculations
jorge_quintero at ciencias.uis.edu.co
- [gmx-users] Free Energy Calculations
jorge_quintero at ciencias.uis.edu.co
- [gmx-users] free energy calculations for two ligands
Sai Kumar Ramadugu
- [gmx-users] Fw: query regarding pdb2gmx program for protein with metal and a ligand
sonali dhindwal
- [gmx-users] Fw: query regarding pdb2gmx program for protein with metal and a ligand
Mark Abraham
- [gmx-users] Fw: query regarding pdb2gmx program for protein with metal and a ligand
Justin A. Lemkul
- [gmx-users] Fwd: Deprotonated Cys
David van der Spoel
- [gmx-users] Fwd: pdb2gmx command
bharat gupta
- [gmx-users] Fwd: pdb2gmx command
David van der Spoel
- [gmx-users] g_bundle problem
Stefan Hoorman
- [gmx-users] g_bundle problem
Justin A. Lemkul
- [gmx-users] g_bundle problem
Justin A. Lemkul
- [gmx-users] g_bundle problem
Milan Melichercik
- [gmx-users] Re: g_bundle problem
Stefan Hoorman
- [gmx-users] Re: g_bundle problem
Justin A. Lemkul
- [gmx-users] Re: Re: g_bundle problem
Stefan Hoorman
- [gmx-users] Re: Re: g_bundle problem
Justin A. Lemkul
- [gmx-users] Re: Re: Re: g_bundle problem
Stefan Hoorman
- [gmx-users] Re: Re: Re: g_bundle problem
Justin A. Lemkul
- [gmx-users] Re: Re: Re: Re: g_bundle problem
Stefan Hoorman
- [gmx-users] Re: Re: Re: Re: g_bundle problem
Justin A. Lemkul
- [gmx-users] g_cluster
ROHIT MALSHE
- [gmx-users] g_cluster
David van der Spoel
- [gmx-users] g_covar & g_anaeig problems
Arne.Wagner at student.uib.no
- [gmx-users] g_covar & g_anaeig problems
Jared James Thompson
- [gmx-users] g_covar & g_anaeig problems
Tsjerk Wassenaar
- [gmx-users] g_covar -ref
vijaya subramanian
- [gmx-users] g_covar -ref
vijaya subramanian
- [gmx-users] g_covar -ref
Tsjerk Wassenaar
- [gmx-users] g_covar -ref
vijaya subramanian
- [gmx-users] g_covar -ref
Tsjerk Wassenaar
- [gmx-users] g_covar -ref
vijaya subramanian
- [gmx-users] g_covar -ref
Tsjerk Wassenaar
- [gmx-users] g_covar -ref
vijaya subramanian
- [gmx-users] g_covar -ref
Tsjerk Wassenaar
- [gmx-users] Re: g_desort
chris.neale at utoronto.ca
- [gmx-users] Re: g_desort
Chris Neale
- [gmx-users] g_dist and vsites
Joe Joe
- [gmx-users] g_dist and vsites
David van der Spoel
- [gmx-users] g_dist and vsites
Joe Joe
- [gmx-users] g_dist and vsites
Joe Joe
- [gmx-users] g_dist and vsites
David van der Spoel
- [gmx-users] g_dist and vsites
Joe Joe
- [gmx-users] g_dist and vsites
Joe Joe
- [gmx-users] g_dist and vsites
Joe Joe
- [gmx-users] g_dist and vsites
David van der Spoel
- [gmx-users] g_dist and vsites
Joe Joe
- [gmx-users] g_dist and vsites
Joe Joe
- [gmx-users] g_dist output
John Shultz
- [gmx-users] g_dist output
Justin A. Lemkul
- [gmx-users] g_dist output
John Shultz
- [gmx-users] g_dist output
Justin A. Lemkul
- [gmx-users] g_dist output
John Shultz
- [gmx-users] g_dist output
Justin A. Lemkul
- [gmx-users] g_dist output
John Shultz
- [gmx-users] g_dist output
Justin A. Lemkul
- [gmx-users] g_dist output
John Shultz
- [gmx-users] g_hbond
shahab shariati
- [gmx-users] g_hbond
David van der Spoel
- [gmx-users] g_hbond output
vedat durmaz
- [gmx-users] g_hbond output
David van der Spoel
- [gmx-users] g_helix
Carla Jamous
- [gmx-users] g_helix
Justin A. Lemkul
- [gmx-users] g_mindist output
Dian Jiao
- [gmx-users] g_mindist output
Justin A. Lemkul
- [gmx-users] g_mindist output
Dian Jiao
- [gmx-users] g_mindist output
Mark Abraham
- [gmx-users] g_mindist periodic boundary condition
Dian Jiao
- [gmx-users] g_mindist periodic boundary condition
Mark Abraham
- [gmx-users] g_mindist periodic boundary condition
Dian Jiao
- [gmx-users] g_mindist periodic boundary condition
Tsjerk Wassenaar
- [gmx-users] g_mindist periodic boundary condition
Mark Abraham
- [gmx-users] g_mindist periodic boundary condition
Dian Jiao
- [gmx-users] g_mindist periodic boundary condition
Tsjerk Wassenaar
- [gmx-users] g_mindist periodic boundary condition
Dian Jiao
- [gmx-users] g_nmeig_d error: can't allocate region
sarbani chattopadhyay
- [gmx-users] g_nmeig_d error: can't allocate region
Berk Hess
- Re: RE: [gmx-users] g_nmeig_d error: can't allocate region
sarbani chattopadhyay
- [gmx-users] g_order 4.0.7
Jayeeta Ghosh
- [gmx-users] g_order 4.0.7
Justin A. Lemkul
- [gmx-users] g_order 4.0.7
Jayeeta Ghosh
- [gmx-users] g_order 4.0.7
Justin A. Lemkul
- [gmx-users] g_rdf
politr at fh.huji.ac.il
- [gmx-users] g_rdf
Justin A. Lemkul
- [gmx-users] g_rdf
Justin A. Lemkul
- [gmx-users] g_rms warning
Carla Jamous
- [gmx-users] g_rms warning
Tsjerk Wassenaar
- [gmx-users] g_sas
pawan raghav
- [gmx-users] g_sas
Tsjerk Wassenaar
- [gmx-users] g_sas
Mark Abraham
- [gmx-users] g_wham error
Gard Nelson
- [gmx-users] g_wham error
Justin A. Lemkul
- [gmx-users] g_wham error
Gard Nelson
- [gmx-users] g_wham error
Justin A. Lemkul
- [gmx-users] g_wham error
Justin A. Lemkul
- [gmx-users] g_wham error
Jochen Hub
- [gmx-users] gen_vel error
Carla Jamous
- [gmx-users] gen_vel error
Justin A. Lemkul
- [gmx-users] gen_vel error
Mark Abraham
- [gmx-users] genion: can you place the ions at one location in the box?
Justin A. Lemkul
- [gmx-users] genion: can you place the ions at one location in the box?
Justin A. Lemkul
- [gmx-users] genion: can you place the ions at one location in the box?
Justin A. Lemkul
- [gmx-users] genion: can you place the ions at one location in the box?
Smiruthi Ramasubramanian
- [gmx-users] genion: can you place the ions at one location in the box?
Smiruthi Ramasubramanian
- [gmx-users] git installation error
babu gokul
- [gmx-users] git installation error
Sander Pronk
- [gmx-users] Re: gmx-users Digest, Vol 71, Issue 102
Amil Anderson
- [gmx-users] Re: gmx-users Digest, Vol 71, Issue 105
程迪
- [gmx-users] Re: gmx-users Digest, Vol 71, Issue 105
程迪
- [gmx-users] Re: gmx-users Digest, Vol 71, Issue 37
sunita gupta
- [gmx-users] Re: gmx-users Digest, Vol 71, Issue 37 (Calculating Binding Affinity between Protein and Ligand using FEP)
Justin A. Lemkul
- [gmx-users] gmx_fatal.c, line: 481
carolsilva1 at cantv.net
- [gmx-users] gmx_fatal.c, line: 481
Sander Pronk
- [gmx-users] GPU GROMACS
Jack Shultz
- [gmx-users] GPU GROMACS
Berk Hess
- [gmx-users] gromacs 4.0 on CRAY-XT4
BIN ZHANG
- [gmx-users] gromacs 4.0 on CRAY-XT4
Mark Abraham
- [gmx-users] gromacs 4.0 on CRAY-XT4
BIN ZHANG
- [gmx-users] gromacs 4.0 on CRAY-XT4
Mark Abraham
- [gmx-users] gromacs 4.0 on CRAY-XT4
Roland Schulz
- [gmx-users] gromacs 4.0 on CRAY-XT4
BIN ZHANG
- [gmx-users] gromacs 4.0 on CRAY-XT4
Roland Schulz
- [gmx-users] gromacs 4.0 on CRAY-XT4
BIN ZHANG
- [gmx-users] Gromacs 4.0.6 installation error
Dian Jiao
- [gmx-users] Gromacs 4.0.6 installation error
Justin A. Lemkul
- [gmx-users] Gromacs 4.0.6 installation error
Dian Jiao
- [gmx-users] Gromacs 4.0.6 installation error
Justin A. Lemkul
- [gmx-users] Gromacs 4.0.6 installation error
Mark Abraham
- [gmx-users] Gromacs 4.0.6 installation error
Dian Jiao
- [gmx-users] gromacs memory usage
Amit Choubey
- [gmx-users] gromacs memory usage
Mark Abraham
- [gmx-users] gromacs memory usage
Amit Choubey
- [gmx-users] gromacs memory usage
Tsjerk Wassenaar
- [gmx-users] gromacs memory usage
Roland Schulz
- [gmx-users] gromacs memory usage
Amit Choubey
- [gmx-users] gromacs memory usage
Roland Schulz
- [gmx-users] gromacs memory usage
Amit Choubey
- [gmx-users] gromacs memory usage
Roland Schulz
- [gmx-users] gromacs memory usage
Amit Choubey
- [gmx-users] gromacs memory usage
Roland Schulz
- [gmx-users] gromacs memory usage
Amit Choubey
- [gmx-users] gromacs memory usage
Roland Schulz
- [gmx-users] gromacs memory usage
Mark Abraham
- [gmx-users] gromacs memory usage
Alexey Shvetsov
- [gmx-users] gromacs memory usage
Amit Choubey
- [gmx-users] Re: GROMACS PME on BLUEGENE
Mark Abraham
- [gmx-users] Gromacs website
Justin A. Lemkul
- [gmx-users] gromacs/mopac interface
Vitaly V. Chaban
- [gmx-users] harmonic restraints
Ajeeta kaushiki
- [gmx-users] harmonic restraints
Mark Abraham
- [gmx-users] harmonic restraints
XAvier Periole
- [gmx-users] How to add a new non-bonded interaction into Gromacs
Tandia, Adama
- [gmx-users] How to add a new non-bonded interaction into Gromacs
Mark Abraham
- [gmx-users] how to analye a single structure (NMR or X-ray) by PCA?
Justin A. Lemkul
- [gmx-users] how to analye a single structure (NMR or X-ray) by PCA?
Tsjerk Wassenaar
- [gmx-users] how to analye a single structure (NMR or X-ray) by PCA?
xi zhao
- [gmx-users] how to combine 2 DPPC lipid bilayers
edmund lee
- [gmx-users] how to combine 2 DPPC lipid bilayers
Justin A. Lemkul
- [gmx-users] Re: How to control the density
teklebrh at ualberta.ca
- [gmx-users] Re: How to control the density
Justin A. Lemkul
- [gmx-users] how to get angle-time data?
Wu Rongqin
- [gmx-users] how to get angle-time data?
XAvier Periole
- [gmx-users] how to get angle-time data?
Mark Abraham
- [gmx-users] How to include sodium ion
Lum Nforbi
- [gmx-users] How to include sodium ion
Justin A. Lemkul
- [gmx-users] Re: How to include sodium ion (Reply to Justin's mail)
Oliver Stueker
- [gmx-users] Re: How to include sodium ion (Reply to Justin's mail)
Lum Nforbi
- [gmx-users] Re: How to include sodium ion (Reply to Justin's mail)
Justin A. Lemkul
- [gmx-users] How to merge 2 simulation boxes?
程迪
- [gmx-users] How to merge 2 simulation boxes?
Amit Choubey
- [gmx-users] How to merge 2 simulation boxes?
Mark Abraham
- [gmx-users] Re: How to merge 2 simulation boxes?
Vitaly V. Chaban
- [gmx-users] how to reconstruct potentials of mean force through time series analysis of SMD or pulling simulations
xi zhao
- [gmx-users] how to reconstruct potentials of mean force through time series analysis of SMD or pulling simulations
Justin A. Lemkul
- [gmx-users] how to reconstruct potentials of mean force through time series analysis of SMD or pulling simulations
xi zhao
- [gmx-users] how to reconstruct potentials of mean force through time series analysis of SMD or pulling simulations
Justin A. Lemkul
- [gmx-users] how to reconstruct potentials of mean force through time series analysis of SMD or pulling simulations
xi zhao
- [gmx-users] how to reconstruct potentials of mean force through time series analysis of SMD or pulling simulations
xi zhao
- [gmx-users] how to reconstruct potentials of mean force through time series analysis of SMD or pulling simulations
Justin A. Lemkul
- [gmx-users] how to reconstruct potentials of mean force through time series analysis of SMD or pulling simulations
Justin A. Lemkul
- [gmx-users] how to reconstruct potentials of mean force through time series analysis of SMD or pulling simulations
Berk Hess
- [gmx-users] how to set pull_rate
Qian Wang
- [gmx-users] how to set pull_rate
Justin A. Lemkul
- [gmx-users] huge field.xvg output
Dmitri Dubov
- [gmx-users] huge field.xvg output
Berk Hess
- [gmx-users] Hydrogen Bond Acceptor-Donor List
Anirban Ghosh
- [gmx-users] Hydrogen Bond Acceptor-Donor List
Mark Abraham
- [gmx-users] implcit solvent
milad ekramnia
- [gmx-users] implcit solvent
Roland Schulz
- [gmx-users] implicit solvent
milad ekramnia
- [gmx-users] inaccuracy in g_dipoles log
Dmitri Dubov
- [gmx-users] inaccuracy in g_dipoles log
Berk Hess
- [gmx-users] Inner product between old and new vector <= 0.0!
程迪
- [gmx-users] Inner product between old and new vector <= 0.0!
Justin A. Lemkul
- [gmx-users] intrinsic viscosity
cesteban at unsl.edu.ar
- [gmx-users] intrinsic viscosity
Mark Abraham
- [gmx-users] intrinsic viscosity
David van der Spoel
- [gmx-users] isopropanol parameters?
Jose Borreguero
- [gmx-users] isopropanol parameters?
David van der Spoel
- [gmx-users] isopropanol parameters?
Jose Borreguero
- [gmx-users] large number of molecules
ksm tprk
- [gmx-users] large number of molecules
Dallas B. Warren
- [gmx-users] large number of molecules
ksm tprk
- [gmx-users] large number of molecules
Justin A. Lemkul
- [gmx-users] large number of molecules
Justin A. Lemkul
- [gmx-users] large number of molecules
Justin A. Lemkul
- [gmx-users] large number of molecules
Oliver Stueker
- [gmx-users] large number of molecules
ksm tprk
- [gmx-users] large number of molecules
Justin A. Lemkul
- [gmx-users] LIE energy values for dimers
jorge_quintero at ciencias.uis.edu.co
- [gmx-users] LIE energy values for dimers
David van der Spoel
- [gmx-users] LIE energy values for dimers
jorge_quintero at ciencias.uis.edu.co
- [gmx-users] Literature for DNA Binding Protein Simulations
Arden Perkins
- [gmx-users] Literature for DNA Binding Protein Simulations
Justin A. Lemkul
- [gmx-users] Literature for DNA Binding Protein Simulations
Arden Perkins
- [gmx-users] Literature for DNA Binding Protein Simulations
Justin A. Lemkul
- [gmx-users] Literature for DNA Binding Protein Simulations
Mark Abraham
- [gmx-users] local destabilization of bilayer
afsaneh maleki
- [gmx-users] local destabilization of bilayer
Justin A. Lemkul
- [gmx-users] local destabilization of bilayer
afsaneh maleki
- [gmx-users] local destabilization of bilayer
Justin A. Lemkul
- [gmx-users] make ghost atom
Park, Jae Hyun nmn
- [gmx-users] make ghost atom
ilona.baldus at bioquant.uni-heidelberg.de
- [gmx-users] make ghost atom
Jochen Hub
- [gmx-users] MD localized in the active site
Anna Marabotti
- [gmx-users] MD localized in the active site
Erik Marklund
- [gmx-users] MD localized in the active site
Justin A. Lemkul
- [gmx-users] MD localized in the active site
Tsjerk Wassenaar
- [gmx-users] mdrun_d not running in parallel
sarbani chattopadhyay
- [gmx-users] mdrun_d not running in parallel
Justin A. Lemkul
- [gmx-users] mdrun_d not running in parallel
Mark Abraham
- [gmx-users] Re: mdrun_d not running in parallel
Sarath Kumar
- [gmx-users] Re: mdrun_d not running in parallel
Mark Abraham
- [gmx-users] mean force.
lammps lammps
- [gmx-users] mean force.
Jochen Hub
- [gmx-users] Re: Minimizing a structure having a heteroatom
bharat gupta
- [gmx-users] Re: Minimizing a structure having a heteroatom
Mark Abraham
- [gmx-users] mix berger ff with opls
chris.neale at utoronto.ca
- [gmx-users] mix berger ff with opls
BIN ZHANG
- [gmx-users] mix berger ff with opls
Marc Ferdinand Lensink
- [gmx-users] mix berger ff with opls
chris.neale at utoronto.ca
- [gmx-users] mix berger ff with opls
BIN ZHANG
- [gmx-users] mix berger ff with opls
BIN ZHANG
- [gmx-users] modified VdW potential
Cristiano De Michele
- [gmx-users] MPI problem------Cannot compile and link MPI code with cc
Gavin Melaugh
- [gmx-users] MPI problem——Cannot compile and link MPI code with cc
DreamCatcher
- [gmx-users] MPI problem——Cannot compile and link MPI code with cc
Mark Abraham
- [gmx-users] Re: MPI problem——Cannot compile and link MPI code with cc
DreamCatcher
- [gmx-users] Re: MPI problem——Cannot compile and link MPI code with cc
Justin A. Lemkul
- [gmx-users] Multiprotein lipid bilayer
ram bio
- [gmx-users] Multiprotein lipid bilayer
Justin A. Lemkul
- [gmx-users] Multiprotein lipid bilayer
ram bio
- [gmx-users] Multiprotein lipid bilayer
Justin A. Lemkul
- [gmx-users] Multiprotein lipid bilayer
ram bio
- [gmx-users] Negative number of RMSD calculations left in g_cluster
Bob Johnson
- [gmx-users] Negative number of RMSD calculations left in g_cluster
David van der Spoel
- [gmx-users] new/old gromacs-wiki
Christian Seifert
- [gmx-users] new/old gromacs-wiki
Mark Abraham
- [gmx-users] NPT MD Run Problem
teklebrh at ualberta.ca
- [gmx-users] Re: NPT MD Run Problem
Justin A. Lemkul
- [gmx-users] Re: NPT MD Run Problem
teklebrh at ualberta.ca
- [gmx-users] Re: NPT MD Run Problem
Justin A. Lemkul
- [gmx-users] NVE mdp
Ramachandran G
- [gmx-users] NVE mdp
Mark Abraham
- [gmx-users] NVE of water
Ran Friedman
- [gmx-users] NVE of water
Berk Hess
- [gmx-users] NVE of water
Andrea
- [gmx-users] NVE of water
Berk Hess
- [gmx-users] NVE of water
Justin A. Lemkul
- [gmx-users] NVE of water
Ran Friedman
- [gmx-users] NVE of water
Mark Abraham
- [gmx-users] NVE of water
Ran Friedman
- [gmx-users] NVE of water
Berk Hess
- [gmx-users] NVE of water
Ran Friedman
- [gmx-users] NVT simulation and mdp file
teklebrh at ualberta.ca
- [gmx-users] NVT simulation and mdp file
Justin A. Lemkul
- [gmx-users] NVT simulation and mdp file
Justin A. Lemkul
- [gmx-users] NVT simulation and mdp file
Justin A. Lemkul
- [gmx-users] NVT simulation and mdp file
teklebrh at ualberta.ca
- [gmx-users] NVT simulation and mdp file
Justin A. Lemkul
- [gmx-users] NVT simulation and mdp file
teklebrh at ualberta.ca
- [gmx-users] NVT simulation and mdp file
Justin A. Lemkul
- [gmx-users] NVT simulation and mdp file
teklebrh at ualberta.ca
- [gmx-users] NVT simulation and mdp file
Justin A. Lemkul
- [gmx-users] omit solvent's coordinates in output file
vedat durmaz
- [gmx-users] omit solvent's coordinates in output file
Justin A. Lemkul
- [gmx-users] omit solvent's coordinates in output file
Mark Abraham
- [gmx-users] On the new web site, how does one make a user contribution?
Bruce D. Ray
- [gmx-users] On the new web site, how does one make a user contribution?
Justin A. Lemkul
- [gmx-users] On the new web site, how does one make a user contribution?
Rossen Apostolov
- [gmx-users] On the new web site, how does one make a user contribution?
Bruce D. Ray
- [gmx-users] On the new web site, how does one make a user contribution?
Bruce D. Ray
- SV: [gmx-users] Order parameter for unsaturated lipid chain in UAmodel
Tim Sirk
- SV: [gmx-users] Order parameter for unsaturated lipid chain in UAmodel
Tim Sirk
- [gmx-users] output forces between group of atoms
BIN ZHANG
- [gmx-users] output forces between group of atoms
Mark Abraham
- [gmx-users] output forces between group of atoms
BIN ZHANG
- [gmx-users] oxydiff
Sunil Thapa
- [gmx-users] oxydiffusion
Sunil Thapa
- [gmx-users] parallel
Gavin Melaugh
- [gmx-users] parallel
Mark Abraham
- [gmx-users] Parallel pulling with Gromacs 4.0.7: COMM mode problem
Aykut Erbas
- [gmx-users] Parallel pulling with Gromacs 4.0.7: COMM mode problem
chris.neale at utoronto.ca
- [gmx-users] Parallel pulling with Gromacs 4.0.7: COMM mode problem
chris.neale at utoronto.ca
- [gmx-users] Parallel pulling with Gromacs 4.0.7: COMM mode problem
Aykut Erbas
- [gmx-users] Parallel pulling with Gromacs 4.0.7: COMM mode problem
chris.neale at utoronto.ca
- [gmx-users] Parallel pulling with Gromacs 4.0.7: COMM mode problem
Aykut Erbas
- [gmx-users] Parallel pulling with Gromacs 4.0.7: COMM mode problem
Chris Neale
- [gmx-users] Parallel pulling with Gromacs 4.0.7: COMM mode problem
Aykut Erbas
- [gmx-users] Parallel pulling with Gromacs 4.0.7: COMM mode problem
Berk Hess
- [gmx-users] Parallel pulling with Gromacs 4.0.7: COMM mode problem
Aykut Erbas
- [gmx-users] Parallel pulling with Gromacs 4.0.7: COMM mode problem
Berk Hess
- [gmx-users] Parallel pulling with Gromacs 4.0.7: COMM mode problem
Aykut Erbas
- [gmx-users] parallel simulations
Gavin Melaugh
- [gmx-users] parallel simulations
Gavin Melaugh
- [gmx-users] Parallel vs Serial Gromacs Run Results
Sikandar Mashayak
- [gmx-users] Parallel vs Serial Gromacs Run Results
Mark Abraham
- [gmx-users] pdb & gro files
Carla Jamous
- [gmx-users] pdb & gro files
Andrea
- [gmx-users] pdb & gro files
Mark Abraham
- [gmx-users] Re: pdb2gmx command
bharat gupta
- [gmx-users] Re: pdb2gmx command
Justin A. Lemkul
- [gmx-users] Please help me with ACPYPI
TRANG NGUYEN
- [gmx-users] Please help to change the force field
Alexandr Sorochan
- [gmx-users] Please help to change the force field
Mark Abraham
- [gmx-users] POPC Membrane + protein dynamics
padhu at ncbs.res.in
- [gmx-users] POPC Membrane + protein dynamics
Justin A. Lemkul
- [gmx-users] POPC Membrane + protein dynamics
ravi sharma
- [gmx-users] POPC Membrane + protein dynamics
Justin A. Lemkul
- [gmx-users] POPC Membrane + protein dynamics
ravi sharma
- [gmx-users] Position restrained dynamics crash
sukesh chandra gain
- [gmx-users] Pressure average problem
nishap.patel at utoronto.ca
- [gmx-users] Pressure average problem
Mark Abraham
- [gmx-users] Pressure average problem
nishap.patel at utoronto.ca
- [gmx-users] Re: Problem with GROMACS, please guide me
XAvier Periole
- [gmx-users] Re: Problem with GROMACS, please guide me
Vitaly V. Chaban
- [gmx-users] problem with icc compiler
Thomas Schlesier
- [gmx-users] Re: problem with icc compiler
Thomas Schlesier
- [gmx-users] Re: problem with icc compiler
Mark Abraham
- [gmx-users] problem with icc compiler
Thomas Schlesier
- [gmx-users] problem with icc compiler
Mark Abraham
- [gmx-users] problem with icc compiler
Erik Brandt
- [gmx-users] Re: problem with icc compiler
Thomas Schlesier
- [gmx-users] Re: problem with icc compiler
Berk Hess
- [gmx-users] Re:problem with interaction energy calculated by g_energy
Qiong Zhang
- [gmx-users] Re:problem with interaction energy calculated by g_energy
Qiong Zhang
- [gmx-users] Re:problem with interaction energy calculated by g_energy
Qiong Zhang
- [gmx-users] Re:problem with interaction energy calculated by g_energy
Mark Abraham
- [gmx-users] Re:problem with interaction energy calculated by g_energy
Qiong Zhang
- [gmx-users] Re:problem with interaction energy calculated by g_energy
Mark Abraham
- [gmx-users] Re:problem with interaction energy calculated by g_energy
Qiong Zhang
- [gmx-users] problem with interaction energy calculated by g_energy
Qiong Zhang
- [gmx-users] problem with interaction energy calculated by g_energy
Mark Abraham
- [gmx-users] problem with the energy minimization of a system composed of two NA+ ions and explicit water
Ozge Engin
- [gmx-users] problem with the energy minimization of a system composed of two NA+ ions and explicit water
Justin A. Lemkul
- [gmx-users] problem with the energy minimization of a system composed of two NA+ ions and explicit water
Berk Hess
- [gmx-users] problem with the size of freeze groups
jampani srinivas
- [gmx-users] problem with the size of freeze groups
Berk Hess
- [gmx-users] problem with the size of freeze groups
jampani srinivas
- [gmx-users] problem with the size of freeze groups
jampani srinivas
- [gmx-users] problem with using pdb2gmx on a single amino acid
Joe Joe
- [gmx-users] problem with using pdb2gmx on a single amino acid
Justin A. Lemkul
- [gmx-users] problems with non pbc simulations in parallel
Gavin Melaugh
- [gmx-users] problems with non pbc simulations in parallel
Maurício Menegatti Rigo
- [gmx-users] problems with non pbc simulations in parallel
Gavin Melaugh
- [gmx-users] problems with non pbc simulations in parallel
Maurício Menegatti Rigo
- [gmx-users] problems with non pbc simulations in parallel
Berk Hess
- [gmx-users] problems with non pbc simulations in parallel
Gavin Melaugh
- [gmx-users] Problems with parallel run
Gavin Melaugh
- [gmx-users] Problems with parallel run
Oliver Stueker
- [gmx-users] Problems with parallel run
Gavin Melaugh
- [gmx-users] Problems with umbrella sampling
Jennifer Casey
- [gmx-users] Problems with umbrella sampling
Berk Hess
- [gmx-users] Re: Problems with umbrella sampling
Thomas Schlesier
- [gmx-users] protein in dppc
edmund lee
- [gmx-users] protein in dppc
Justin A. Lemkul
- [gmx-users] query regarding atom type
sonali dhindwal
- [gmx-users] query regarding atom type
Justin A. Lemkul
- [gmx-users] query regarding atom type
sonali dhindwal
- [gmx-users] query regarding atom type
Justin A. Lemkul
- [gmx-users] query regarding atom type
durmaz at zib.de
- [gmx-users] query regarding atom type
sonali dhindwal
- [gmx-users] query regarding neutralisation of charge on protein
sonali dhindwal
- [gmx-users] query regarding neutralisation of charge on protein
Justin A. Lemkul
- [gmx-users] query regarding normal mode analysis
sarbani chattopadhyay
- [gmx-users] query regarding normal mode analysis
sarbani chattopadhyay
- [gmx-users] Query regarding toplogy of Manganese ion in protein
sonali dhindwal
- [gmx-users] Re: Query regarding toplogy of Manganese ion in protein
sonali dhindwal
- [gmx-users] Query regarding toplogy of Manganese ion in protein
Justin A. Lemkul
- [gmx-users] Query regarding toplogy of Manganese ion in protein
sonali dhindwal
- [gmx-users] Query regarding toplogy of Manganese ion in protein
Mark Abraham
- [gmx-users] rdf problem
Antonia V.
- [gmx-users] rdf problem
Erik Marklund
- [gmx-users] rdf problem
Antonia V.
- [gmx-users] rdf problem
Antonia V.
- [gmx-users] rdf problem
Dallas B. Warren
- [gmx-users] Re Can GROMACs use multiple van der Waals potentials and multiple van der Waals potential cutoffs?
hong bingbing
- [gmx-users] Re Can GROMACs use multiple van der Waals potentials and multiple van der Waals potential cutoffs?
David van der Spoel
- [gmx-users] reading xtc,trr and edr files
Paymon Pirzadeh
- [gmx-users] reading xtc,trr and edr files
Mark Abraham
- [gmx-users] Regarding defining termini in new rtp entry
Joe Joe
- [gmx-users] Regarding defining termini in new rtp entry
Justin A. Lemkul
- [gmx-users] Regarding defining termini in new rtp entry
Tsjerk Wassenaar
- [gmx-users] Regarding defining termini in new rtp entry
Joe Joe
- [gmx-users] regarding gen-pairs
Gavin Melaugh
- [gmx-users] regarding gen-pairs
XAvier Periole
- [gmx-users] regarding gen-pairs
Mark Abraham
- [gmx-users] Regarding increasing the time period of previous simulation
sonali dhindwal
- [gmx-users] Regarding increasing the time period of previous simulation
Mark Abraham
- [gmx-users] removal of center of mass motion needed for accelerated water molecules?
Yang Wang
- [gmx-users] rmsf question
Andrei Neamtu
- [gmx-users] rmsf question
Mark Abraham
- [gmx-users] rmsf question
Andrei Neamtu
- [gmx-users] rmsf question
Tsjerk Wassenaar
- [gmx-users] rmsf question
Mark Abraham
- [gmx-users] rmsf question
Andrei Neamtu
- [gmx-users] rmsf question
XAvier Periole
- [gmx-users] rmsf question
Mark Abraham
- [gmx-users] rmsf question
XAvier Periole
- [gmx-users] rmsf question
Tsjerk Wassenaar
- [gmx-users] rmsf question
Andrei Neamtu
- [gmx-users] Re: script to constraint distance between ligand and protein
David Mobley
- [gmx-users] Semi-isotropic pressure coupling.
sapna sarupria
- [gmx-users] Signal 11 crash
程迪
- [gmx-users] Signal 11 crash
Sander Pronk
- [gmx-users] Signal 11 crash
程迪
- [gmx-users] Signal 11 crash
Justin A. Lemkul
- [gmx-users] simulating several proteins
Cristiano De Michele
- [gmx-users] simulating several proteins
Mark Abraham
- [gmx-users] simulating several proteins
Cristiano De Michele
- [gmx-users] simulating several proteins
Justin A. Lemkul
- [gmx-users] simulating several proteins
Cristiano De Michele
- [gmx-users] simulation with CsCl
Cecilia Fernándz Gauna
- [gmx-users] simulation with CsCl
Justin A. Lemkul
- [gmx-users] Simultaing protein, water and lipid together
radhika jaswal
- [gmx-users] Simultaing protein, water and lipid together
Justin A. Lemkul
- [gmx-users] SiO2
ROHIT MALSHE
- [gmx-users] Steered MD: Gromacs 4.0
Matthew L. Danielson
- [gmx-users] Steered MD: Gromacs 4.0
Justin A. Lemkul
- [gmx-users] Steered MD: Gromacs 4.0
chris.neale at utoronto.ca
- [gmx-users] Subtraction of xpm files
Itamar Kass
- [gmx-users] Subtraction of xpm files
Justin A. Lemkul
- [gmx-users] suitable parameter settings for intermolecular non-bonded interaction
vedat durmaz
- [gmx-users] suitable parameter settings for intermolecular non-bonded interaction
Mark Abraham
- [gmx-users] suitable parameter settings for intermolecular non-bonded interaction
vedat durmaz
- [gmx-users] suitable parameter settings for intermolecular non-bonded interaction
Mark Abraham
- [gmx-users] suitable parameter settings for intermolecular non-bonded interaction
vedat durmaz
- [gmx-users] suitable parameter settings for intermolecular non-bonded interaction
Sander Pronk
- [gmx-users] T-coupling groups
Zuzana Benkova
- [gmx-users] T-coupling groups
Justin A. Lemkul
- [gmx-users] T-coupling groups
jampani srinivas
- [gmx-users] T-coupling groups
Zuzana Benkova
- [gmx-users] Temperature Coupling and Coupling-Groups
shayamra at post.tau.ac.il
- [gmx-users] Temperature Coupling and Coupling-Groups
Justin A. Lemkul
- [gmx-users] Temperature Coupling and Coupling-Groups
shayamra at post.tau.ac.il
- [gmx-users] Temperature Coupling and Coupling-Groups
David van der Spoel
- [gmx-users] Temperature Coupling and Coupling-Groups
Justin A. Lemkul
- [gmx-users] test particle insertion with PME
Schneck at uni-heidelberg.de
- [gmx-users] test particle insertion with PME
Berk Hess
- [gmx-users] Thickness
afsaneh maleki
- [gmx-users] Thickness
Justin A. Lemkul
- [gmx-users] topol.top
Zuzana Benkova
- [gmx-users] topol.top
Zuzana Benkova
- [gmx-users] topol.top
Mark Abraham
- [gmx-users] topol.top
Zuzana Benkova
- [gmx-users] topol.top
Zuzana Benkova
- [gmx-users] topolbuild 1.3, revision to topolbuild that incorporates OPLS-AA support
Bruce D. Ray
- [gmx-users] topolbuild 1.3, revision to topolbuild that incorporates OPLS-AA support
Bruce D. Ray
- [gmx-users] topolbuild 1.3, revision to topolbuild that incorporates OPLS-AA support
Joe Joe
- [gmx-users] Re: topology does not match
Justin A. Lemkul
- [gmx-users] trjcat and trjconv
Chih-Ying Lin
- [gmx-users] trjcat and trjconv
Justin A. Lemkul
- [gmx-users] trjconv and ions
Joe Joe
- [gmx-users] trjconv and ions
Tsjerk Wassenaar
- [gmx-users] trjconv and ions
Joe Joe
- [gmx-users] trn file
Maurício Menegatti Rigo
- [gmx-users] trn file
Justin A. Lemkul
- [gmx-users] trn file
Maurício Menegatti Rigo
- [gmx-users] trn file
Justin A. Lemkul
- [gmx-users] Turn-off water optimisation
Thomas Schlesier
- [gmx-users] Turn-off water optimisation
Berk Hess
- [gmx-users] Turn-off water optimisation
Thomas Schlesier
- [gmx-users] Turn-off water optimisation
Berk Hess
- [gmx-users] Turn-off water optimisation
Ran Friedman
- [gmx-users] Turn-off water optimisation
Thomas Schlesier
- [gmx-users] Turn-off water optimisation
Thomas Schlesier
- [gmx-users] Urey Bradley Parameters in GROMACS
PRADEEP VENKATARAMAN
- [gmx-users] Urey Bradley Parameters in GROMACS
Justin A. Lemkul
- [gmx-users] Using lennard jones and buckingham terms simultaneously
Justin A. Lemkul
- [gmx-users] Using lennard jones and buckingham terms simultaneously
Mark Abraham
- [gmx-users] Using lennard jones and buckingham terms simultaneously
Mark Abraham
- [gmx-users] Using lennard jones and buckingham terms simultaneously
Mark Abraham
- [gmx-users] Re: Using lennard jones and buckingham terms simultaneously
Vitaly V. Chaban
- [gmx-users] Using lennard jones and buckingham terms simultaneously
Matthew Watkins
- [gmx-users] Using lennard jones and buckingham terms simultaneously
Matthew Watkins
- [gmx-users] Using lennard jones and buckingham terms simultaneously
Gareth Tribello
- [gmx-users] Using lennard jones and buckingham terms simultaneously
Gareth Tribello
- [gmx-users] Using lennard jones and buckingham terms simultaneously
Gareth Tribello
- [gmx-users] Using trjcat to subdivide a trajectory into two trajectories (depending on a criterion)
Berk Hess
- [gmx-users] Using trjcat to subdivide a trajectory into two trajectories (depending on a criterion)
Christian Seifert
- [gmx-users] vapor phase pmf correction
Robin C. Underwood
- [gmx-users] vapor phase pmf correction
David van der Spoel
- [gmx-users] video: Introduction to molecular dynamics simulations
anna_gromacs at libero.it
- [gmx-users] water box with prescribed volume and density
grivet
- [gmx-users] water box with prescribed volume and density
Justin A. Lemkul
- [gmx-users] water box with prescribed volume and density
grivet
- [gmx-users] water box with prescribed volume and density
Justin A. Lemkul
- [gmx-users] waterbox
nishap.patel at utoronto.ca
- [gmx-users] waterbox
Justin A. Lemkul
- [gmx-users] waterbox
nishap.patel at utoronto.ca
- [gmx-users] waterbox
Justin A. Lemkul
- [gmx-users] What is Dmax, and are .tpr files transferrable between operating systems
Warren Gallin
- [gmx-users] What is Dmax, and are .tpr files transferrable between operating systems
Justin A. Lemkul
- [gmx-users] what's the differences between double precise version and single precise?
DreamCatcher
- [gmx-users] what's the differences between double precise version and single precise?
Justin A. Lemkul
- [gmx-users] Where can I find the source code of x2top?
程迪
- [gmx-users] Where can I find the source code of x2top?
Justin A. Lemkul
- [gmx-users] Re: x2top
Vitaly V. Chaban
- [gmx-users] Re: x2top
Justin A. Lemkul
- [gmx-users] Re: x2top
程迪
- [gmx-users] Re: x2top
Justin A. Lemkul
- [gmx-users] Re: x2top
Vitaly V. Chaban
- [gmx-users] Re: x2top
程迪
- [gmx-users] Re:x2top
Vitaly V. Chaban
- 回复: [gmx-users] Re Can GROMACs use multiple van der Waals potentials and multiple van der Waals potential cutoffs?
hong bingbing
- 答复: [gmx-users] compile problem on Centos X86_64 with gcc44 and fftw2
Wu Rongqin
- Re: 答复: [gmx-users] compile problem on Centos X86_64 with gcc44 and fftw2
Mark Abraham
Last message date:
Wed Mar 31 23:50:12 CEST 2010
Archived on: Thu Nov 14 12:08:24 CET 2013
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