[gmx-users] g_dist output

John Shultz jackygrahamez at gmail.com
Tue Mar 9 13:56:46 CET 2010


Hello,

I am seeking clarification on what this output means. I believe it
says that the x axis is divided into 4 time intervals and they are
plotted against a y axis that measures total distance along all 3
dimensional coordinates.
Am I reading this correctly?

# This file was created Sat Jan 30 00:20:03 2010
# by the following command:
# g_dist -f md.gro -s md.tpr -n index.ndx
#
# g_dist is part of G R O M A C S:
#
# Glycine aRginine prOline Methionine Alanine Cystine Serine
#
@    title "Distance"
@    xaxis  label "Time (ps)"
@    yaxis  label "Distance (nm)"
@TYPE xy
@ view 0.15, 0.15, 0.75, 0.85
@ legend on
@ legend box on
@ legend loctype view
@ legend 0.78, 0.8
@ legend length 2
@ s0 legend "|d|"
@ s1 legend "d\sx\N"
@ s2 legend "d\sy\N"
@ s3 legend "d\sz\N"
   0.0000000    0.0619448    0.0583303    0.0099401   -0.0183282




-- 
Jack



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