[gmx-users] g_order 4.0.7
jayeetaedu at hotmail.com
Thu Mar 11 20:12:27 CET 2010
Dear Gromacs Users,
I am having similar problem that was reported by Sarah about a year ago. I am using Gromacs4.0.7. I am using the following command to make the index file.
make_ndx -f dppc128.gro -o sn1.ndx
> a C34
> a C36
> a C50
> del 0-2
I am using following command to calculate the order parameter.
g_order -n sn1.ndx -od
I am using all other default input file names. I am only getting two output files: sg-ang.xvg and sk-dist.xvg, no order.xvg.
I am not sure how to get around this.
I would really appreciate any help.
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