[gmx-users] g_order 4.0.7

Jayeeta Ghosh jayeetaedu at hotmail.com
Thu Mar 11 20:12:27 CET 2010

Dear Gromacs Users,

I am having similar problem that was reported by Sarah about a year ago. I am using Gromacs4.0.7. I am using the following command to make the index file.

make_ndx -f dppc128.gro -o sn1.ndx
> a C34
> a C36
> ...
> a C50
> del 0-2
> q
I am using following command to calculate the order parameter.

g_order -n sn1.ndx -od 
I am using all other default input file names. I am only getting two output files: sg-ang.xvg and sk-dist.xvg, no order.xvg.

I am not sure how to get around this.

I would really appreciate any help.



Hotmail: Powerful Free email with security by Microsoft.
-------------- next part --------------
An HTML attachment was scrubbed...
URL: <http://maillist.sys.kth.se/pipermail/gromacs.org_gmx-users/attachments/20100311/d2087860/attachment.html>

More information about the gromacs.org_gmx-users mailing list