[gmx-users] free energy

[Justin A. Lemkul]

afsaneh maleki wrote:
> 
> Hi,
>  
> I inserted the protein in bilayer at Z normal and simulated membrane 
> protein. to calculate free energy, it is better to use "umbrella 
> sampling tutorial " from Justin Lemkul or "free energy tutorial" from 
> David Mobley for my system? 

That depends entirely upon the process you want to study.  What free energy do 
you want?

-Justin

>  
> thanks,
> Afsaneh
> 

-- 
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Justin A. Lemkul
Ph.D. Candidate
ICTAS Doctoral Scholar
MILES-IGERT Trainee
Department of Biochemistry
Virginia Tech
Blacksburg, VA
jalemkul[at]vt.edu | (540) 231-9080
http://www.bevanlab.biochem.vt.edu/Pages/Personal/justin

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