[gmx-users] g_wham error
Jochen Hub
jochen at xray.bmc.uu.se
Mon Mar 22 16:09:08 CET 2010
>
>
> g_wham -ix PREPxvg.dat -it PREPtpr.dat
The -ix option expects the pull positions. If you want to provide the
pull forces to g_wham, use the -if option.
Cheers,
Jochen
>
> PREPxvg.dat and PREPtpr.dat are lists of the respective xvg and tpr
> files. They are both in the same order, although they are ordered
> alphabetically instead of sequentially (i'm not sure if that matters
> or not). Here's PREPxvg.dat to illustrate the ordering:
>
> onePREP0.xvg onePREP16.xvg onePREP22.xvg onePREP29.xvg onePREP7.xvg
> onePREP10.xvg onePREP17.xvg onePREP23.xvg onePREP2.xvg onePREP8.xvg
> onePREP11.xvg onePREP18.xvg onePREP24.xvg onePREP30.xvg onePREP9.xvg
> onePREP12.xvg onePREP19.xvg onePREP25.xvg onePREP3.xvg
> onePREP13.xvg onePREP1.xvg onePREP26.xvg onePREP4.xvg
> onePREP14.xvg onePREP20.xvg onePREP27.xvg onePREP5.xvg
> onePREP15.xvg onePREP21.xvg onePREP28.xvg onePREP6.xvg
>
> Thanks for the help
> Gard
--
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Dr. Jochen Hub
Molecular Biophysics group
Dept. of Cell & Molecular Biology
Uppsala University. Box 596, 75124 Uppsala, Sweden.
Phone: +46-18-4714451 Fax: +46-18-511755
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