[gmx-users] g_clustsize output

[David van der Spoel]

On 2010-05-20 04.55, toma0052 at umn.edu wrote:
> Hello,
> I have a system of dimers which spontaneously assemble into clusters. I
> would like to get a plot of the number of clusters of size s vs s. In
> looking at g_clustsize I am able to obtain the average number of
> clusters vs time, the average cluster size vs time and a histogram of
> the average number of molecules in a cluster of size s. Am I missing
> something? Is there a way for me to get the number of clusters of a
> particular size vs cluster size?
>
> Thanks,
> Mike Tomasini
g_clustsize will make an xpm plot for this as well, IIRC it is called 
csize.xpm. You can turn it into eps using xpm2ps.


-- 
David van der Spoel, Ph.D., Professor of Biology
Dept. of Cell & Molec. Biol., Uppsala University.
Box 596, 75124 Uppsala, Sweden. Phone:	+46184714205.
spoel at xray.bmc.uu.se    http://folding.bmc.uu.se