[gmx-users] Percentage of H-bonds

Carla Jamous carlajamous at gmail.com
Mon Oct 11 15:49:27 CEST 2010

Hi everyone,

I tried to analyze the H-bonds in my trajectory with g-hbond and I analysed
the xpm and ndx file. But now I need to know the percentage of existence of
each hbond during my trajectory. Is there a way to do it with a command
line? Or is there a program (someone told me there are python programs for
analysis of gromacs trajectories) to extract this information from the .xpm

Thank you.

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