[gmx-users] git release-4-5-patches behind proxy

[César Ávila]

I want to calculate secondary structure propensities of residues.

Following Mark's message on thread
Re: [gmx-users] secondary structure propensities of residues


I would like to get the release-4.5-patches from git (in order to get
do_dssp.c). Nevertheless I found problems while trying to fetch it from git
repository due to the proxy. (I followed the advices on
http://www.gromacs.org/Developer_Zone/Git/Git_Tutorial#Git_behind_a_proxy

$ git clone git://git.gromacs.org/gromacs.git
Initialized empty Git repository in ~/gromacs/.git/
2011/08/09 10:37:46 socat[17264] E CONNECT git.gromacs.org:9418: Forbidden
fatal: The remote end hung up unexpectedly

I tried the alternative suggested by Roland

git clone  http://repo.or.cz/r/gromacs.git
Initialized empty Git repository in ~/gromacs/.git/

The gromacs directory is created and populated. After this I ran

$git branch
* master

$git checkout --track -b release-4-5-patches origin/release-4-5-patches
fatal: git checkout: updating paths is incompatible with switching branches.
Did you intend to checkout 'origin/release-4-5-patches' which can not be
resolved as commit?

Is this a problem of the server I am using or is it just a misuse of git?

Thanks








2011/3/22 Roland Schulz <roland at utk.edu>

> you can clone from http://repo.or.cz/r/gromacs.git if you have problems
> with a proxy.
>
> On Mon, Mar 21, 2011 at 10:54 PM, Alif M Latif <prism_dead at yahoo.com>wrote:
>
>>    Dear Gromacs Developers,
>>
>> Just dropping by to say THANK YOU for v4.5.4, surely is updated version of
>> 4.5.3 with all the bugfixes yes?. I'm having problem getting past my
>> university's proxy server to use git. Now hopefully I can continue my
>> research and solve git problems later..Your hard work is greatly
>> appreciated!
>>
>> MUHAMMAD ALIF MOHAMMAD LATIF
>> Laboratory of Theoretical and Computational Chemistry
>> Department of Chemistry
>> Faculty of Science
>> Universiti Putra Malaysia
>> 43400 UPM Serdang, Selangor
>> MALAYSIA
>>
>>
>>
>> --
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>
>
>
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