[gmx-users] Re:

Mark Abraham Mark.Abraham at anu.edu.au
Tue Aug 23 00:30:09 CEST 2011


On 23/08/2011 2:09 AM, Janowicz, Adrianna C. wrote:
> Janowicz, Adrianna C. wrote:
> I'm trying to install gromacs-3.3&  am constantly getting errors regarding
> configure: error: C++ preprocessor "/lib/cpp" fails sanity check
> or
> CC non executable.
>
> Is this because my version of Linux is too new because these errors were
> not happening when I installed the newest versions of Gromacs?

Possibly systems no longer come with /lib/cpp, or you don't have all of 
the development tools installed. Try "locate cpp" and (as root) symlink 
that to /lib/cpp

Mark

>
>
> There may be some incompatibility, but it's hard to say without more
> details. Is there any particular reason you're trying to install an
> ancient Gromacs version?
>
> -Justin
>
> --
> ========================================
>
> Justin A. Lemkul
> Ph.D. Candidate
> ICTAS Doctoral Scholar
> MILES-IGERT Trainee
> Department of Biochemistry
> Virginia Tech
> Blacksburg, VA
> jalemkul[at]vt.edu | (540) 231-9080
> http://www.bevanlab.biochem.vt.edu/Pages/Personal/justin
>
>
> I'm installing the older version in order to run a simulation of a micelle
> using a .pdb from the UCalgary site (Peter Tieleman's site) that has a 0
> mass listed for a few molecules. Prior, you said that that file should
> work with an older version of Gromacs.
>
>
>
>
>




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