[gmx-users] Regarding xpm2ps

bipin singh bipinelmat at gmail.com
Wed Aug 24 13:46:47 CEST 2011


Thanks for your reply,
I am attaching the xpm file which I got from g_sham and also attaching
the eps output got from
xpm2ps.As you can see there is no axis range(PC1 and PC2)  labeled in eps file.
As the PC1 range is from -4 to +4 and PC2 range from -5 to +4, I want
the x-axis range in eps file from -4 to +4(PC1)
and y-axis range from -5 to +4(PC2) regardless of the data values in xpm file.
But I am unable to get using .m2p file.

On Wed, Aug 24, 2011 at 16:22, Justin A. Lemkul <jalemkul at vt.edu> wrote:
>
>
> bipin singh wrote:
>>
>> Hello,
>> I am using the below .m2p file as input for xpm2ps, but not able to
>> get axis range label.
>>
>
> What axis range do you obtain?  If your data do not actually span from -4 to
> 4, there's not much you can do.  I was assuming you had data that did fit
> this range.  You also didn't say which tool produced the .xpm file; some
> programs can be forced to adjust the data range, but others can't.
>
> -Justin
>
>> ; Matrix options
>> titlefont       = Helvetica     ; Matrix title Postscript Font name
>> titlefontsize   = 20.0          ; Matrix title Font size (pt)
>> legend          = yes           ; Show the legend
>> legendfont      = Helvetica     ; Legend name Postscript Font name
>> legendfontsize  = 12.0          ; Legend name Font size (pt)
>> legendlabel                     ; Used when there is none in the .xpm
>> legend2label                    ; Id. when merging two xpm's
>> xbox            = 0           ; x-size of a matrix element
>> ybox            = 0          ; y-size of a matrix element
>> matrixspacing   = 20.0          ; Space between 2 matrices
>> xoffset         = 0.0           ; Between matrix and bounding box
>> yoffset         = 0.0           ; Between matrix and bounding box
>>
>> ; X-axis options
>> x-lineat0value  = no            ; Draw line at matrix value==0
>> x-major         = 4        ; Major tick spacing
>> x-minor         = 2         ; Id. Minor ticks
>> x-firstmajor    = 0           ; Offset for major tick
>> x-majorat0      = no            ; Additional Major tick at first frame
>> x-majorticklen  = 8.0           ; Length of major ticks
>> x-minorticklen  = 4.0           ; Id. Minor ticks
>> x-label         =               ; Used when there is none in the .xpm
>> x-font          = Helvetica     ; Axis label PostScript Font
>> x-fontsize      = 12            ; Axis label Font size (pt)
>> x-tickfont      = Helvetica     ; Tick label PostScript Font
>> x-tickfontsize  = 8             ; Tick label Font size (pt)
>>
>> ;Y-axis options
>> y-lineat0value  = no
>> y-major         = 4
>> y-minor         = 2
>> y-firstmajor    = 0
>> y-majorat0      = no
>> y-majorticklen  = 8.0
>> y-minorticklen  = 4.0
>> y-label         =
>> y-fontsize      = 12
>> y-font          = Helvetica
>> y-tickfontsize  = 8
>> y-tickfont      = Helvetica
>>
>> On Wed, Aug 24, 2011 at 00:52, Justin A. Lemkul <jalemkul at vt.edu> wrote:
>>>
>>> bipin singh wrote:
>>>>
>>>> Hello,
>>>>
>>>> I have xpm matrix file, for converting this file to ps format I am using
>>>> xpm2ps
>>>> e.g: xpm2ps -f file.xpm -o file.eps . But there is no axis range label
>>>> mentioned for x and y-axis,
>>>> in ps file.Please let me know how to set x and y axis range label in ps
>>>> file.
>>>> for example I want to set the x and y-axis range from -4 to +4.
>>>>
>>>>
>>> Use an .m2p file:
>>>
>>> http://manual.gromacs.org/online/m2p.html
>>>
>>> -Justin
>>>
>>> --
>>> ========================================
>>>
>>> Justin A. Lemkul
>>> Ph.D. Candidate
>>> ICTAS Doctoral Scholar
>>> MILES-IGERT Trainee
>>> Department of Biochemistry
>>> Virginia Tech
>>> Blacksburg, VA
>>> jalemkul[at]vt.edu | (540) 231-9080
>>> http://www.bevanlab.biochem.vt.edu/Pages/Personal/justin
>>>
>>> ========================================
>>> --
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>>
>>
>>
>
> --
> ========================================
>
> Justin A. Lemkul
> Ph.D. Candidate
> ICTAS Doctoral Scholar
> MILES-IGERT Trainee
> Department of Biochemistry
> Virginia Tech
> Blacksburg, VA
> jalemkul[at]vt.edu | (540) 231-9080
> http://www.bevanlab.biochem.vt.edu/Pages/Personal/justin
>
> ========================================
> --
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-- 
-----------------------
Regards,
Bipin Singh
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