[gmx-users] g_hbond

Steven Neumann s.neumann08 at gmail.com
Wed Aug 31 15:36:16 CEST 2011


Hi Gromacs Users,

I have calculated hydrogen bonds and collisions between my ligands and every
single residue using g_hbond. Looking at the criteria adpoted by Gromacs I
found impossible that number of hydrogen bonds were higher than number of
collisions... And what is interesting in one of my residue I obtained result
like this... All Hbonds with Glycine - 1872, All Collisions 704.

Does anyone know how is it possible?

Steven
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