[gmx-users] Library file in.m2p not found

[ahmet yıldırım]

Dear Justin and Mark,

Problem solved.Thanks for your helps

I copied to the directory /usr/share/gromacs/top it (in.m2p).
root at ubuntu:/home/ab/Desktop# cp in.m2p /usr/share/gromacs/top

05 Ocak 2011 13:45 tarihinde Justin A. Lemkul <jalemkul at vt.edu> yazdı:

>
>
> ahmet yıldırım wrote:
>
>> Dear Mark,
>>
>> I am using the Gromacs on the Ubuntu for month but have not encountered
>> any problems.I did a search in the file system of Ubuntu. I do not have a
>> GMXLIB folder in a file system.
>>
>> What should I do?
>>
>>
> If you're telling xpm2ps to use in.m2p, that file has to exist somewhere.
>  The error message is telling you that it does not exist in the working
> directory (i.e., the directory where you're issuing the command), or the
> standard Gromacs library directory (
> http://www.gromacs.org/Documentation/Terminology/Environment_Variables#GMXLIB
> ).
>
> If you tell any Gromacs tool to use certain input, it has to exist; Gromacs
> isn't going to magically create all the proper files for you.
>
> -Justin
>
>  05 Ocak 2011 10:42 tarihinde Mark Abraham <Mark.Abraham at anu.edu.au<mailto:
>> Mark.Abraham at anu.edu.au>> yazdı:
>>
>>
>>    On 5/01/2011 7:37 PM, ahmet yıldırım wrote:
>>
>>        Dear users,
>>
>>        I receive the following error when I entered the command "xpm2ps
>>        -f ss.xpm -o ss.eps -di in.m2p"
>>        Fatal error:
>>        Library file in.m2p not found in current dir nor in default
>>        directories.
>>        (You can set the directories to search with the GMXLIB path
>>        variable)
>>
>>        I am using the Gromacs 4.05 on the Ubuntu 9.1 Operation System.
>>        I installed the Gromacs from Synaptic Package Manager.
>>        I used echo $GMXDATA but it did not show anything. The pdb2gmx,
>>        g_gyrate,...etc files are in the directory /usr/bin/.
>>        The GMXRC file is in the directory
>>        /usr/share/gromacs/shell-specific.
>>
>>
>>    Are you following these instructions?
>>
>> http://www.gromacs.org/Downloads/Installation_Instructions#Getting_access_to_GROMACS_after_installation
>>
>>    Mark
>>    --     gmx-users mailing list    gmx-users at gromacs.org
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>>
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>>
>>
>>
>> --
>> Ahmet YILDIRIM
>>
>>
> --
> ========================================
>
> Justin A. Lemkul
> Ph.D. Candidate
> ICTAS Doctoral Scholar
> MILES-IGERT Trainee
> Department of Biochemistry
> Virginia Tech
> Blacksburg, VA
> jalemkul[at]vt.edu | (540) 231-9080
> http://www.bevanlab.biochem.vt.edu/Pages/Personal/justin
>
> ========================================
>
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-- 
Ahmet YILDIRIM
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