[gmx-users] Energy minimization

[bharat gupta]

Hi all,

I am minimizing my protein (230 amino acids)  with the minim.mdp file given
in the lysozyme tutorial but I am not getting a stable graph .. I checked
the manual also to look for parameters but I am not able to find such
information there apart from the theory about the minimzation algos and
process.. So can anybody direct me to some relevant link or help me out in
this regard ??



-- 
Bharat
Ph.D. Candidate
Room No. : 7202A, 2nd Floor
Biomolecular Engineering Laboratory
Division of Chemical Engineering and Polymer Science
Pusan National University
Busan -609735
South Korea
Lab phone no. - +82-51-510-3680, +82-51-583-8343
Mobile no. - 010-5818-3680
E-mail : monu46010 at yahoo.com
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