[gmx-users] Energy minimization

Amit Choubey kgp.amit at gmail.com
Mon Jan 17 09:19:32 CET 2011


Can you provide more details ? Which graph are you talking about ?

Amit

On Mon, Jan 17, 2011 at 12:05 AM, bharat gupta <bharat.85.monu at gmail.com>wrote:

> Hi all,
>
> I am minimizing my protein (230 amino acids)  with the minim.mdp file given
> in the lysozyme tutorial but I am not getting a stable graph .. I checked
> the manual also to look for parameters but I am not able to find such
> information there apart from the theory about the minimzation algos and
> process.. So can anybody direct me to some relevant link or help me out in
> this regard ??
>
>
>
> --
> Bharat
> Ph.D. Candidate
> Room No. : 7202A, 2nd Floor
> Biomolecular Engineering Laboratory
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>
>
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