Mr Bernard Ramos
bgrquantum at yahoo.com
Mon Jan 31 05:30:19 CET 2011
Do I need to type in g_luck instead?
--- On Mon, 1/31/11, Justin A. Lemkul <jalemkul at vt.edu> wrote:
From: Justin A. Lemkul <jalemkul at vt.edu>
Subject: Re: [gmx-users] luck
To: "Discussion list for GROMACS users" <gmx-users at gromacs.org>
Date: Monday, January 31, 2011, 12:11 PM
Mr Bernard Ramos wrote:
> Hi everyone!
> I have two questions.
> 1. after I installed gromacs 4.5.3 and "which mdrun" was able to give the correct path, I was not able to run "luck". Instead, "luck" gives an error "command not found". Is this ok? What went wrong? Do I need to install again gromacs?
The program is now called g_luck.
> 2. I tried doing "pdb2gmx". The error points the structure file "*.pdb" as the error. Does this in dicate that the program was not installed properly or there is an error with the pdb file.
If the program has given you a fatal error, then the program is correctly installed and working. It is your input that is somehow wrong. Without the actual error message, it's impossible to say what's wrong.
Justin A. Lemkul
ICTAS Doctoral Scholar
Department of Biochemistry
jalemkul[at]vt.edu | (540) 231-9080
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